Microcaecilia unicolor: 115475376
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Entry
115475376 CDS
T09142
Symbol
CPSF4
Name
(RefSeq) cleavage and polyadenylation specificity factor subunit 4 isoform X1
KO
K14404
cleavage and polyadenylation specificity factor subunit 4
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115475376 (CPSF4)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115475376 (CPSF4)
03019 Messenger RNA biogenesis [BR:
muo03019
]
115475376 (CPSF4)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
115475376 (CPSF4)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA processing factors
3' end processing
Cleavage and polyadenylation specificity factor (CPSF) complex
115475376 (CPSF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-CCCH
zf_CCCH_4
zf-CCCH_3
Torus
zf-CCCH_2
zf-CCHC
zf-CCCH_4
zf-C3H1
zf-CCHC_3
Nab2-like_zf-CCCH_
Motif
Other DBs
NCBI-GeneID:
115475376
NCBI-ProteinID:
XP_030066895
UniProt:
A0A6P7YUH2
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All DBs
Position
8:complement(11338169..11353844)
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AA seq
270 aa
AA seq
DB search
MQELIACVDHIRFDLEIAVEQQLGAQPLPFPGMDKSGAAVCEFFLKSACVKAGMCPFRHI
SGEKTVVCKHWLRGLCKKGDQCEFLHEYDMTKMPECYFYSKFGECSNKECPFLHIDPESK
IKDCPWYDRGFCKHGPLCRHRHTRRVICVNYLVGFCPEGPTCKFMHPRFELPMGTTEQPP
LPPQTPIPPKQNNNPILQRSSSLIQLTNLNSPVNLQRTPQVIGVMPSSQPNSTGGRGPRP
LDQVTCYKCGEKGHYANRCSKGHLAFLSGQ
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcaggagctcatcgcttgcgtggaccacatcaggttcgacctggagatagcggtggag
cagcagctcggggcccagccgctgccctttcccggcatggacaaatcaggagctgcagtc
tgtgaattctttttgaaatcagcatgtgttaaagcagggatgtgtccttttcggcacatc
agcggagaaaagacagttgtttgcaaacactggttgcgaggactgtgcaagaaaggagac
cagtgtgaattcctccatgaatatgacatgaccaaaatgcccgagtgctacttttattcc
aaatttggagagtgcagtaacaaagaatgcccgtttttacatattgacccagaatctaag
attaaggactgcccttggtatgacagaggattctgtaaacacggtcccctttgcagacat
cggcacactcgaagagtcatctgtgttaattatctggtgggattctgtccggaggggcca
acttgtaaattcatgcatcctcgatttgagttgccgatgggaaccactgagcagccacct
cttcctccacaaacaccaattccaccaaagcaaaataacaatccgatattacagaggtcg
tcatccctaattcagttaacaaatctaaactcacctgttaacctgcaaaggactccacag
gttataggggtgatgccatcatcccagcccaacagtactggaggcagaggaccccggcca
ctggaccaggtcacctgctataagtgtggtgagaaaggacattatgcgaacagatgtagc
aaaggacatttagctttcctcagtggacagtaa
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