Microcaecilia unicolor: 115475387
Help
Entry
115475387 CDS
T09142
Symbol
PARN
Name
(RefSeq) LOW QUALITY PROTEIN: poly(A)-specific ribonuclease PARN
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115475387 (PARN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115475387 (PARN)
Enzymes [BR:
muo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
115475387 (PARN)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
115475387 (PARN)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CAF1
RNA_bind
RRM_Thc1
NCBP3
RRM_1
YqeH-like_C
FMP23
Motif
Other DBs
NCBI-GeneID:
115475387
NCBI-ProteinID:
XP_030066909
UniProt:
A0A6P7YUE5
LinkDB
All DBs
Position
8:complement(36670377..36871633)
Genome browser
AA seq
596 aa
AA seq
DB search
MEVTRSNFKHNLPKVCEAIKEADFLAIDGEFSGISDGPSVSTLTNGFDTPEERYQKLKKH
SMXFLLFQFGLCXFKYDNTEAKYLIKSFNXYSFPKPFNRSSPDVKFVCQSSSIDFLANQG
FDFNKVFRNGIPYLNQDEERQLREQYEERRSQANGISTVSYISPNSAKXPVNVPEEHKAF
IEKVVEKVDDFLQIKKKSTGIGACTGYQRKLIFQTLNWKHPRGIHVETLESEKKERYIVV
SKVDEEERRQREQQKQAREQEELDAAVGFSRVIHAISNSAKLVVGHNMLLDVMHTIHQFF
CQLPDDINEFKEVTTCVLPRLLDTKLMASTQPFKEIINNTSLAELEKRLKETPFKPPKVE
SAEEFPSYDTASEQLHEAGYDAYITGLCFISMANFLGSFLNPPKLNVSARSKLIEPFYNK
LFLMRVMDIPYLNLQGPDLQPKRDHVLHVTFPREWKTSDLYQLFSAFGNIQVSWIDDTSA
FVSLSQPEQVQIAVNTSKYAESYRIXTYAEYVEKKHEQKQPKRKWSENSWKEIERKRLKT
HYVPYMPQTLDYFTNSFIAHSAAGKMSMSPIQEETGSDDLEEGEVQSGEQDPNRFR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
atggaggttacccggagcaattttaagcacaatttaccaaaagtatgtgaagcaattaag
gaagcagacttcttggctattgatggagaattttcaggaatcagtgatgggccatctgtt
agcacgttaacaaatggctttgacacaccagaagaaagatatcagaagcttaaaaagcat
tctatgngatttttactgtttcagtttggcctttgcnactttaaatatgataacacagaa
gctaagtacttaataaagtcatttaacntttatagttttccgaagcctttcaacagaagt
tcaccagatgttaagttcgtttgtcagagttcaagtatagactttctggcaaaccaaggg
tttgattttaataaagtttttcggaatggaattccttacttgaatcaggacgaggaaaga
cagcttcgagaacaatatgaggaaagacgatcccaagccaatggtataagcacagtatcc
tacatctctcccaacagtgcaaagnaacctgtgaatgtccctgaagagcataaagctttt
attgagaaagtggtagagaaagtagacgactttttacagataaagaaaaaaagtactgga
attggagcatgtacaggataccagagaaaacttatttttcagaccttaaactggaaacac
ccaagaggcatccatgttgagaccctggagtcagaaaagaaagagcgttatattgtcgtc
agcaaggtcgatgaagaagagcggagacaaagagagcagcagaaacaagctagagaacag
gaagaacttgatgctgcagtgggtttttccagagtcatccatgccatttccaattctgca
aagcttgtcgtgggacacaacatgcttttagatgtcatgcacaccattcaccagttcttt
tgtcagctgcctgatgacatcaatgagtttaaagaagtaacaacgtgtgtgcttcccaga
ttgctggataccaaactgatggcaagcacacagccttttaaggaaatcattaacaacaca
tcccttgcagaactggagaagcgattaaaagaaacaccattcaaacctcctaaagttgaa
agtgcagaagagtttccaagttatgacacggcttctgaacagcttcatgaagcgggctac
gatgcatacatcacaggactctgcttcatctccatggcaaacttcctaggttccttcctc
aaccctcccaagctcaatgtttctgctcgatcaaaactcattgaacctttttataacaag
ttatttcttatgagggttatggacataccatatctcaatctacaagggccagacttacaa
ccaaaacgagatcatgtccttcatgttacctttccaagagaatggaagacaagtgatctg
tatcagcttttcagtgcatttggtaacattcaagtatcctggattgatgatacatcagcg
tttgtgtcacttagccagcctgaacaagttcaaatagccgtcaacaccagcaagtatgca
gaaagctatcggattncaacctacgcagagtatgtggagaagaagcatgagcagaaacag
ccaaagagaaaatggtctgagaacagctggaaagaaatagagaggaagaggttaaaaact
cactatgtaccatatatgccacagactctagattactttactaatagttttatagctcac
agtgcagcaggaaagatgagtatgagtcctattcaagaggaaacaggctctgatgatttg
gaagaaggagaagttcaaagtggagagcaagatccaaacagattccggtga
DBGET
integrated database retrieval system
