Microcaecilia unicolor: 115476038
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Entry
115476038 CDS
T09142
Symbol
RAD50
Name
(RefSeq) DNA repair protein RAD50
KO
K10866
DNA repair protein RAD50 [EC:3.6.-.-]
Organism
muo
Microcaecilia unicolor
Pathway
muo03440
Homologous recombination
muo03450
Non-homologous end-joining
muo04218
Cellular senescence
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115476038 (RAD50)
03450 Non-homologous end-joining
115476038 (RAD50)
09140 Cellular Processes
09143 Cell growth and death
04218 Cellular senescence
115476038 (RAD50)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
muo03032
]
115476038 (RAD50)
03400 DNA repair and recombination proteins [BR:
muo03400
]
115476038 (RAD50)
DNA replication proteins [BR:
muo03032
]
Eukaryotic type
DNA Replication Termination Factors
MRN complex
115476038 (RAD50)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
MRN(MRX) complex
115476038 (RAD50)
BRCA1-C complex
115476038 (RAD50)
NHEJ (non-homologous end-joining)
MRX complex
115476038 (RAD50)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
Rad50_zn_hook
AAA_21
SbcC_Walker_B
SMC_N
Intein_splicing
AAA_15
AAA_29
AAA_24
WH_Rok
AAA_13
Motif
Other DBs
NCBI-GeneID:
115476038
NCBI-ProteinID:
XP_030068017
UniProt:
A0A6P7YKN7
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All DBs
Position
8:173409513..173509476
Genome browser
AA seq
1312 aa
AA seq
DB search
MSKIDKMSILGVRSFGIEDKHKQIITFFTPLTILVGPNGAGKTTIIECLKYVTTGDFPPG
TKGNTFVHDPKVAHETDVRAQIRLQFRNVNGEVVAVQRSMVCTQKGKKTEFKTLEGVITR
LKHGEKVSLSTKCAELDREMISSLGVSTSVLNNVIFCHQEDSNWPLSEGRQLKLKFDEIF
SATRYIKALETLRQVRQKQGQKVRECQTELKYLKQNRAKAQEIQDQLHDKEVQLAASKEH
VKSIENQLDPLKARLADIDQNLCKVMRLDNEIKALESRKKLMEKDNHDLEEKMEKVFQGT
DEQLGEMYQNHQRTVREKERRLTEHQRELDSSNRDCQRLNREKSDLLVEQGRLQLQADRH
QQNIRKRDSLIQALAVQLELDGYERAPFNDRQVQSFHELVKEGQAKEEEAANQQAREFSG
KEATKQRQIDEMRDKKTGLQRTIDLKSDIQNKKQLELKNVKSELQQLEGSVDRIQELDQE
LAKATVDLVNAERASSIEDSKAEITELQREKGELDRTLRKLDQEMEQLNMHTMTRTQLDM
LKKDKADKDEQIRKIRSRHNDELTSLLGYFPNKKQLEDWIYSKVKDINQSRDKITKLNKT
LASAEQNKNHMSTELKQKEEQLASYEEKLFEVCGSQDFESDLSRLQDEIEKSSKQRAMLA
GATAVYTQFITQLTEDNQPCCPVCQRIFPSEAELQDVINDMQSKLRLVPDKLKSTETELK
RREKRRDEMMGLKPIRQTLADLVERDIPELRNKLTTINREIQRLKAEIEEEDTLLATFIS
EEESAKVCLQDIALMDRYQTELRDVDRRIAQQATKLQGVDLTRTVQQVNQEKQEKQLRLD
TVSSTIELKRKLIQDQQEQIQQLKSTINEIKSEKLQISSNLQRRQQLEEQAVELTTEVKS
LHREIKDARDQILPLESTLEKLQQEKQELMDMKNRNCKAAQEKLNDVREKIKNITSFMKE
IEKYIQDGREDYKEKKENELHELTAQLNDCERQKEKINKEMITIRQDIDTQKVQERWLQD
NLTLRKRKEELKGVEAEMNKTMKNMGEMKVMEMRREHQHLETKIEDLKRNHSLALGRQKG
FEEEILRFKRELREPQYKDAEEKYREMMIVMRTTELVNKDLDIYYKTLDQAIMKFHSMKM
EEINKIIRDLWRSTYRGQDIEYIEIRSDADENVSAADKRRTYNYRVVMIKGGAALDMRGR
CSAGQKVLASLIIRLALAETFCLNCGILALDEPTTNLDRENIESLAHALVEIIKSRSQQR
NFQLLIITHDEDFVELLGRSEYVESFYRIRKNIDQCSEIVKCSVSSLDSYVH
NT seq
3939 nt
NT seq
+upstream
nt +downstream
nt
atgtctaaaatagataaaatgagcatccttggagtgcggagttttggaatagaagacaaa
cacaagcaaattattacattctttactcccctgacaattttagtggggccgaatggtgcc
gggaaaacaaccattattgagtgcttgaaatatgtcaccactggagatttcccaccaggc
accaaaggaaacacatttgttcatgatccaaaggttgcccacgagacagatgttagagcc
cagatccgcctgcagttccgaaatgtcaatggtgaggttgtggctgtgcagagatccatg
gtctgtacccagaaaggcaagaaaactgaatttaaaacactggaaggagtgatcaccaga
ttaaaacatggagagaaagtaagcctaagcaccaaatgtgcagaattagatcgagaaatg
atcagctcccttggtgtctccacatccgtgcttaataatgtcattttctgtcatcaagaa
gattctaactggcccttaagtgagggaaggcagctgaagttaaagtttgatgaaatcttt
tcagctacaaggtacattaaagctttggaaaccctacgtcaagtacgtcagaagcaaggc
caaaaggtcagagagtgtcagacagagctgaaatatctgaaacagaaccgagccaaagca
caggaaatccaggaccagctccatgacaaggaagttcaattggctgcatccaaagagcat
gtcaagtctattgaaaatcagctggatcctctcaaggctcgtctggcagacattgaccag
aatctttgcaaagtcatgaggttggacaatgaaataaaagccttagaaagcaggaagaag
ctgatggagaaagataaccatgatctggaagaaaaaatggaaaaggtgtttcaggggaca
gatgagcagctcggtgagatgtaccaaaaccaccagcggacagtgagagagaaggaaagg
agattaacggagcaccagcgggaactggactcatccaaccgggactgccagagactcaac
cgggagaaatctgatctcctggtggaacaggggcgtcttcagctacaggcagatcgccac
cagcagaacatcaggaaacgtgattccttgatccaggcactggcagtacagttggagctc
gatggctacgagcgagcccccttcaatgacagacaagtgcagagttttcacgagctggta
aaggaagggcaggcgaaagaagaggaggctgcaaatcagcaggcaagagaattttctggg
aaagaagccacaaagcagaggcagatcgatgaaatgagagacaagaaaactggactgcaa
agaaccattgacttgaaatcagacattcaaaacaagaagcagctggagctgaaaaacgtg
aagtctgaacttcagcagctggaaggttctgtggacaggattcaagaactggaccaggaa
cttgccaaggctacagttgatctggttaacgctgagagagccagcagcatagaagactca
aaagctgaaattacagagttgcagagagaaaaaggagagctggacaggaccctgcgtaaa
ctggaccaagagatggagcagctgaacatgcacacgatgaccagaacacaattggacatg
ctgaagaaggacaaggctgacaaggatgaacaaatcaggaaaataagatccagacacaat
gatgaattgacctccttgcttggatattttccaaacaaaaaacagctggaagattggatt
tactcgaaagttaaggatattaatcagtctcgggataagattactaaacttaacaaaact
ctggcctctgcagagcagaataagaaccacatgagtactgagttaaagcagaaggaagaa
cagttggccagttatgaagagaaactttttgaggtctgtggaagccaagactttgagagt
gacctcagccggcttcaggatgaaatagaaaagtcttcaaagcagcgggcaatgcttgct
ggggcaactgctgtttatacacagtttattactcagttgacggaagacaaccagccgtgc
tgccctgtttgccagcggatctttccttcggaggctgaattgcaagacgtgataaatgat
atgcagtccaaactgcgcctggtgccggataaactgaagtcaacagagactgagctgaag
agacgagagaaaagacgagatgagatgatggggctgaaaccaataaggcaaaccttggca
gatttggtcgagagggatataccagagctgagaaacaagctgaccaccataaacagagag
attcagcgtttaaaggctgaaatagaagaagaagacacgctgttggctacctttatctcg
gaagaagaaagtgctaaggtttgtctgcaggacattgcactgatggaccggtaccagaca
gagctgcgggatgtagacaggaggatagcacagcaggctaccaagctgcaaggagttgac
ctgactcgcacagtgcaacaggtgaaccaggagaaacaagagaaacagctcagactggat
acagtttctagtacgattgagttgaaacgtaaacttatacaggatcaacaggagcagatc
cagcagctgaagagtaccattaatgaaataaaatcagagaaacttcagatctccagcaac
ctacagcgtcgccagcagctggaggaacaggctgtggagctgaccacagaggtcaaatct
ctgcacagggagatcaaggatgctagggaccaaattttacctttggaatccacgttggaa
aagcttcaacaggagaaacaagaactaatggatatgaagaacagaaactgtaaagcagca
caggaaaagctaaatgatgtgcgagaaaagattaaaaacatcacgtccttcatgaaagaa
attgagaaatatattcaggatggaagagaagactataaagagaaaaaagagaacgagctg
catgaactaactgctcagctgaatgattgtgaaagacaaaaagagaagattaacaaagag
atgatcacaatcagacaagacatcgacacccagaaggttcaggagaggtggctgcaggac
aacctaacattaaggaaaagaaaagaagagctaaaaggggttgaggcagaaatgaacaaa
actatgaagaacatgggtgaaatgaaagtcatggagatgagaagggagcaccagcatcta
gagacaaaaattgaagatctgaagcgaaaccacagtttggcacttggacggcagaaagga
tttgaggaagaaattcttcgattcaagagggaactccgagagccccagtacaaagatgca
gaggagaaatacagagaaatgatgatagttatgagaacaacggaactagtaaacaaggat
cttgacatttattacaagacactagaccaagccataatgaaatttcatagcatgaaaatg
gaagagatcaacaaaattatccgtgatctttggagaagtacttacagaggacaagatatt
gaatatatagaaatccgttctgatgctgatgagaacgtgtcggccgcagataagagaagg
acgtacaactaccgggtggtaatgataaagggcggtgctgccttggacatgagggggagg
tgcagcgctggacaaaaggtgctggcctccctgattatccgactcgcccttgcagagact
ttctgtctcaactgtggtatccttgccctggatgaacccaccacaaacctcgacagagaa
aacattgaatcactcgcacatgctttagttgagataataaagagccgttcacagcaacgc
aacttccagcttcttatcataacacacgatgaagactttgtggagttgctgggccgttca
gagtacgtggagagtttctacaggatcaggaagaatattgaccagtgctcagagattgta
aaatgtagtgttagctctctcgactcgtacgttcattaa
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integrated database retrieval system
