Microcaecilia unicolor: 115476407
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Entry
115476407 CDS
T09142
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
muo
Microcaecilia unicolor
Pathway
muo03440
Homologous recombination
muo03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
115476407 (PALB2)
03460 Fanconi anemia pathway
115476407 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muo03400
]
115476407 (PALB2)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
115476407 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
115476407 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
TSNAXIP1_N
Motif
Other DBs
NCBI-GeneID:
115476407
NCBI-ProteinID:
XP_030068635
UniProt:
A0A6P7YZC8
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Position
8:1451728..1485136
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AA seq
1333 aa
AA seq
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MDETPGRSLTCEERQKLKEKLAFLKQEYNKTFNRLQHSQRTERVKSHVKKKIAEQNCWLN
EEHSGMGISDLREALVSDVGSLDITHVSKMNLNTEKRMTVSFNLQPEFFNIGSKQHESSL
PEDKYVDQKTPTTSTGGGCAQKKNQEKSQRSREKLKRNILELKERKSPCGCSSSAAFLPS
DPLCRTKGLEGRKLDREEQSSPVFKRDGNSLSLKTRRSKSFNSLLTASHFMPEDSDSKEC
LSKAVKEYSPIRVTGLPSCLSYKGDSTSLSQSKSPTDNSRLPELAPSLLVGVAPVTPINA
EKTADVIVCKTNETNGSSPDLAVSNRSLRAQSVVVPCATEDKSSTGERSCSNGELLHNSS
WQNYDETQVKSAALASVSSTAVESPLSSCTVVEGLLFPVEYYVRTTRRMSNCQRKVDLEA
VIYSHLGTSRKGSRRKLKQMAKSNKGSPEAAEREAEVQQDNNNLGLPCSLNQVDSSSRAD
DSILTASRNSITDMCSASSTLTCHRMKATRKGRGKRKSLCKLKTHLPQTFTSINLNTSPS
CLSNESENGKENYEAESNMTLINQERPLAFVTDGAKQVGRAEDFMPCGNQAMGETLQQEE
NTCNLFSQDNFLNLLKETITNDMEELREHKAPEPTVNSERVQTQQFTAQQLITKEFFSQD
ISNSCLHSRRERLLQDKTDGLAQKTCTSSDNSGPNAGIHSGSNFPFHLHNEMLSSKSLIH
SLDITDFHLPDDEFGFLKLEKLNSPLLSDVEPHVAAPFKDEHQTAGHDVTAPVPARKKLL
NAKSKKHEDGVLAAPCNSLSQASHIESHGPLDHSLAKKEFSPSALLSTPACTISLYDAGS
QPPVDTHTAAFPILGLTPAGPLQDPNNVSQVAFCRQELQTSPSSCIKLNTGTSQSRDPGS
TLLAVTSDIKSCVSDVMNTENATCVPQARRTCETKVCSQASESQAGQDLVGQNEPQCDGS
KEFYSRNTKEIKGRVESVSSLCDTLEEGKKGSLQLISMLQTTSDSCAVDVNSVWWKSTDS
SVRELHIVTACESSISVWKPEEPARWKLIHTWSSSKMPVIQVVPFPDTYCCVCIALGSLA
IEELWLLFSCPGEDALQDQLVKSGYIYSVLGLPERRIVSSSRVAEQQFLEIISLSEGGRI
TERRTLMPPEESILAFSEVKGEKSALIGTTVASNIVIWNLVTGQLLKMISIGKSYQAPIC
HKAYSESGLLFIVLSHPYASDGQSPTGAVFTLIATNPKQAESIPVMSYVVPERCTGRYLE
GDVEEWSAAAVLSSGSIAIWDLSMGLCTALLPPSCDGVWALVRWLQPNSCLMAGKKDGSV
YLYKYQGSCAAKG
NT seq
4002 nt
NT seq
+upstream
nt +downstream
nt
atggacgagacacctggtagatcactaacctgtgaggaaagacaaaagttgaaagagaag
ctggcattcttaaaacaagaatataataaaacatttaaccggctacaacattcacaaagg
actgaacgagtaaaatcacatgtgaagaagaaaattgcagagcaaaattgttggcttaat
gaggagcactctggcatgggcatttcagatctgagagaggctctagtctccgatgttggc
agtctggacatcacacatgtatcaaaaatgaacctcaatacagaaaaaagaatgactgtg
tcctttaacttacaacctgaattcttcaacattggtagcaagcagcatgaaagctctttg
ccagaagataaatatgttgatcagaaaacacctacaacttccacaggaggtgggtgtgca
caaaaaaagaaccaagaaaaaagtcaaagaagccgagaaaaattgaaaaggaacatattg
gaactgaaggagagaaaatccccttgcggatgttcttcttctgccgcttttctgccaagt
gatccgctctgtaggacaaaggggttggaaggcagaaagctggatagggaagagcaaagt
tcaccagtatttaagagagatggcaatagtctaagcctaaagactagaaggtcaaagtcc
ttcaactcattgctcacggccagccatttcatgcctgaagattcagattctaaggaatgt
ttaagcaaagctgtcaaagaatatagccctataagagtaactggacttccttcctgccta
tcgtataaaggtgatagcacgtctttgtctcagtccaagtcacctacggacaattctagg
ctcccagaattggcaccatcgcttcttgtaggcgttgctccggtcactcccataaatgct
gagaaaacagcagatgtgatcgtctgcaaaactaatgaaacaaatggttcctcccctgat
ttagctgtgtccaatagatctctgagagcccaatctgtcgtcgttccttgtgctacagaa
gacaaatctagtactggtgagcgttcttgttctaatggtgaactgttgcataacagttca
tggcagaactatgatgagactcaagtaaagtctgctgcactggcaagtgtgtcctctact
gcagtagaaagccctctgagctcttgcacagtggtggaaggtcttctgttcccagtggaa
tactatgtgagaacaactcgacgcatgtccaactgtcagaggaaagtagacctggaagct
gtaatatacagtcatttgggcacaagcaggaaaggatccagaagaaaactcaaacagatg
gccaagtcaaataaaggaagcccagaagcggcagaaagagaggcagaggtgcagcaggat
aacaacaacttgggtcttccttgtagcttaaatcaagttgattcaagtagtagagcagat
gattccatccttactgccagtaggaacagcattactgatatgtgctcagcatccagcaca
ttgacctgtcacaggatgaaagcaaccaggaaaggaagaggaaaaagaaaatcattgtgc
aaattgaagacacatttgccacaaacattcacctctataaacttaaatacaagcccaagc
tgcttgagtaatgagtctgaaaatggaaaagaaaactatgaagcagaatctaacatgaca
ctgataaaccaagagaggccgttggcttttgtgactgatggagcaaagcaagtaggaaga
gctgaagatttcatgccttgtggaaatcaagcaatgggtgaaactttgcagcaggaggag
aacacatgtaatctatttagtcaagataatttcttaaatctgctgaaagaaaccataacc
aatgatatggaagagttaagagagcacaaggctcctgagccaacagtcaactctgaaagg
gttcagactcaacaatttacagcacagcaattaataactaaagaatttttctctcaggat
atctctaattcctgtctacacagcaggagagaaaggctccttcaagataagacagatggc
cttgcacaaaaaacctgtacctcttccgataacagtggacccaatgctggtattcacagt
ggctcaaattttcctttccatttacacaatgaaatgcttagttcaaaaagcctgatacac
agcttggacatcacagatttccatttgccagatgatgaatttggtttcctgaaacttgag
aaactgaattccccactgctgtcggatgtagagccccatgttgctgcaccgttcaaagac
gagcatcagactgctggacatgacgtcactgctcctgttcctgctagaaaaaagctactt
aatgctaaaagtaaaaagcatgaagatggtgttctagctgctccttgcaattcattgtct
caggcatctcacatagaaagccatggtcctctggatcattctctagctaagaaggagttt
tcccccagtgcccttctgtcaacccccgcctgcaccatctcattgtatgatgctggcagt
cagcctcctgtagacacacatacagctgcttttcccatcctgggcttaactccagcaggt
cctctgcaggatcccaacaacgtttcacaggttgcattctgcagacaagagcttcagact
tcgcccagttcctgcataaaacttaacacaggcaccagccaaagtagggatcctggaagc
actttactggctgttacatcagacataaagagctgtgtgtctgacgtgatgaatacagag
aatgctacctgtgtgcctcaagccaggagaacatgtgaaactaaggtatgttcgcaagca
agtgagtcacaagcaggccaagacttggtgggccagaatgagccacaatgtgatggttcc
aaggagttctacagcagaaacaccaaagagatcaaagggagggtggaatctgtatccagt
ttatgtgacacccttgaggaagggaagaaagggagtctccagctgatatccatgttacag
actacatcggactcttgtgctgtggatgtgaacagcgtatggtggaaaagcactgacagc
agtgtcagagagctgcatattgtgacagcttgtgagtcctccatctctgtctggaaacct
gaggaaccagctcgctggaagctcattcatacatggagctcttctaagatgccagtaatc
caggttgtcccttttcctgacacgtactgttgcgtctgcatagctttgggaagtctggca
attgaggagctttggctcctgttttcttgccctggtgaggacgcactacaggaccagctg
gtgaaaagtggctatatatacagcgtgcttgggctacctgagcgtagaattgtcagcagc
agccgggtagcagagcagcagtttctagaaataatctcattgtctgagggaggaagaatc
acagagagacggactctgatgcctccggaagaaagcatcctggccttcagtgaggtgaaa
ggagaaaaaagtgctttgattggcacgactgtagcgagtaacatagtaatttggaatttg
gttactggacagcttctgaagatgatatccattggtaaatcataccaagctcccatctgt
cacaaggcctactctgagtctggcctcttatttattgtcttgagtcacccatatgccagt
gatggtcagtctcctactggtgcggttttcacactgattgcaaccaatcccaagcaagct
gagagcattcccgtgatgtcatacgtagttcctgagagatgcactgggcggtatctggaa
ggagatgtggaggaatggtctgctgcagctgtgctgtcctctggcagcattgccatctgg
gatttatccatgggactctgcactgctctactgccaccttcctgtgatggagtctgggct
ctggtcaggtggttgcagccaaactcttgcttgatggcaggaaagaaagatgggagcgtg
tatctgtacaaataccagggcagctgtgcagctaaaggctaa
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