Microcaecilia unicolor: 115478203
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Entry
115478203 CDS
T09142
Symbol
VPS39
Name
(RefSeq) LOW QUALITY PROTEIN: vam6/Vps39-like protein
KO
K20183
Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39
Organism
muo
Microcaecilia unicolor
Pathway
muo04140
Autophagy - animal
muo04148
Efferocytosis
muo05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
115478203 (VPS39)
04148 Efferocytosis
115478203 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
115478203 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
muo04131
]
115478203 (VPS39)
Membrane trafficking [BR:
muo04131
]
Endosome - Lysosome transport
Tethering complex
Hops complex
115478203 (VPS39)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Vps39_1
CNH
zf-Vps39_C
TPR_Vps41
Clathrin
Beta-prop_RIG_2nd
WD40_like
Motif
Other DBs
NCBI-GeneID:
115478203
NCBI-ProteinID:
XP_030071357
UniProt:
A0A6P7YW45
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Position
9:complement(144049796..144153678)
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AA seq
875 aa
AA seq
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MHDAFDPVPILEKLPLQIECMAAWEEWLLVGTKQGHLLLYRIKKVPGCNQFEVTLEKSNK
NFSKKIQQIHVVPQFKILVSLLDSNVYVHDLLTFQQITAVSKAKGATLFTCDLQHSNTGE
EELRMCVAVRKKLQLFFWKDREFHELQGDLSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVTPLADKKVAVGQDDLTVVLNEEGTCTQKCALNWTDIPMAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGNNIVYVASNHFVWRLVPVSI
AIQIQQLLQDKQFELALQLAKMKDDSDTEKRQQIHHIQNLYAFNLFCQKRFDESMQVFAK
LGTDPTHVIGLYPDLLPSEYKKQLQYPNPVPVLSGAELEKAHLALIDYLTQKRSHLVKQL
NDSDHQSITSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQRLGTENL
QLVFPYSVWVLRDYPEDGLKIFTEDLTEVESLPRDRVLNFLMENFRDLVIPYLEHIILMW
EETGPEFHNCLIKLYCERVQALMKKYLPSLPEGTPLAPAGEEGGELGKYRCKLLGFLEIS
VYYEPEHLISDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDRKK
EGNKDVYLSLLHMYLCPPDVHCLGPIKMKLVEPQANLQAALNVLELHHGKLDTTKAISLL
PANTQIGEIRIFLEKVLEENSQKKRFNQVLKNLLHAEFLRVQEERISHQQVKCVITEEKV
CNMCKKKIGNSAFARYPNAVVVHYYCAKDVCTLDT
NT seq
2628 nt
NT seq
+upstream
nt +downstream
nt
atgcacgacgccttcgatccggttccgatcctggagaagctgccgctgcagatcgaatgt
atggcggcttgggaagaatggcttcttgttggaaccaaacagggacatctgcttctgtac
cgaatcaagaaggtcccaggctgcaaccagtttgaagtcacattggagaaatccaacaag
aatttctcgaagaagattcagcagattcatgttgttcctcagtttaaaatccttgtcagt
ttgttagatagtaatgtgtatgtccatgacctgctgacgtttcagcaaattactgcagtc
tccaaagcaaaaggagcaactctgtttacatgtgacctgcagcactcaaatacaggtgag
gaggagctgaggatgtgcgttgcagtgaggaagaagctgcagcttttcttctggaaggac
agggagttccatgaactgcagggggacctcagtgtgccagatgtgccaaagtccatggca
tggtgtgagaactccatctgtgtgggcttcaagagggattattatctgattagggtagat
ggaaaagggtcaatcaaagaactgttccccacagggaagcagctggagcccctggtgaca
cctctggcagacaaaaaggttgcagttggccaggatgacctcactgtggttctgaatgaa
gagggaacctgtacccagaaatgtgctctgaactggactgacatccccatggccatggaa
catcagcctccatacatcattgcggtactgccaagatatgttgagatccgaacatttgaa
ccaagactattggtgcagagcattgagctgcagaggcctcgtttcattacgtctggaggc
aataacattgtgtatgtagccagcaaccattttgtttggcggctagttccagtctccata
gcaatccagatacagcagctccttcaagataaacagtttgagctggcccttcagcttgca
aaaatgaaggatgattcagacactgaaaaacgccagcagattcaccacatccagaacctc
tatgccttcaacctcttctgccagaagcgctttgatgaatctatgcaggtctttgccaag
cttgggacagatcctacacatgtgattggtctctatcctgatctgttgccctctgagtac
aagaagcagcttcagtaccccaaccctgtacctgtgctttcaggggcggagctggaaaaa
gcacatctagcacttatagactatttgacacagaaaagaagtcatttggtgaaacaacta
aatgactctgaccaccagtcaatcacatctccgctcatggaaggaacacccaccattaag
tccaaaaagaagctactacagatcattgacaccacgttactcaagtgctaccttcacact
aacgtggctttagtggctccattgttgcgattggaaaacaatcactgccacattgaggag
agtgagcatgtactgaagaaggcgcacaagtatagtgagctgatcatcctctatgagaaa
aagggtttgcatgaaaaagctctgcaggtgttggtggatcagtcaaagaaagctaattca
ccactgaaaggccatgagaggacagtgcaatatctacagcgactggggacagagaatcta
cagttggtgttcccctactccgtgtgggtgttgcgagactatccagaggatggactaaag
atatttactgaagatctcactgaggtggagtccctgcctcgagacagggtattaaatttc
ttaatggagaacttcagagaccttgttattccttatctggaacatatcattctcatgtgg
gaagagactggcccagagttccacaactgcctgatcaaactttactgtgagagagtacaa
gccttaatgaagaaatatcttccctccttacctgaaggtacaccactggcccctgctgga
gaggaaggaggggagctaggaaaataccgctgcaaacttcttggttttctggagatttcg
gtttactatgagcctgagcaccttatcagtgacttcccttttgatggcttgctggaggaa
cgcgccctgctgctgggccgaatggggaagcatgagcaggcccttttcatttatgttcac
attttgaaggacaccaaaatggctgaagagtattgccacaaacactatgacagaaaaaaa
gaaggtaacaaagatgtgtacctctccctgctccatatgtacttatgccctcctgatgtt
cactgcttggggccaattaaaatgaagttggtagaacctcaagcaaatctgcaggcagca
ctgaatgtgttagaacttcaccatgggaaacttgataccaccaaggcaataagcctcctt
ccagcgaacacacaaattggggagatccggatcttcctggaaaaggtcttggaggaaaac
tctcaaaaaaaacgatttaatcaagtgctgaagaaccttctacatgcagagtttctgagg
gtgcaggaagagcgaatatcacaccagcaagtgaagtgtgtcatcacagaagagaaggtg
tgtaatatgtgtaaaaagaagattggaaatagtgcctttgcccgatatcctaatgcagtt
gttgtacattattactgtgccaaggatgtgtgtacactggacacctga
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