KEGG T09142: 115479168

Microcaecilia unicolor: 115479168

Entry

115479168         CDS       T09142

Symbol

POLR2D

Name

(RefSeq) DNA-directed RNA polymerase II subunit RPB4

K03012

DNA-directed RNA polymerase II subunit RPB4

Organism

muo Microcaecilia unicolor

Pathway

muo03020

RNA polymerase

muo03420

Nucleotide excision repair

Brite

KEGG Orthology (KO) [BR:muo00001]
09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    115479168 (POLR2D)
  09124 Replication and repair
   03420 Nucleotide excision repair
    115479168 (POLR2D)
09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:muo03021]
    115479168 (POLR2D)
   03400 DNA repair and recombination proteins [BR:muo03400]
    115479168 (POLR2D)
Transcription machinery [BR:muo03021]
Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     115479168 (POLR2D)
DNA repair and recombination proteins [BR:muo03400]
Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      115479168 (POLR2D)

SSDB

Motif

Pfam:

RNA_pol_Rpb4 Maelstrom Tfb4

Other DBs

NCBI-GeneID:

115479168

NCBI-ProteinID:

XP_030072816

UniProt:

A0A6P7Z888

LinkDB

Position

10:complement(147684438..147693943)

AA seq 142 aa
MAAGLSELRAADVEEDASQLVFPKEFENAETLLNSEVHMLLEHRKQQNESAEDEQELSEV
FMKTLNYTARFSRFKNRETIASVRSLLLQKKLHKFELACLANLCPETAEEAKALIPSLEG
RFEDEELQQILDDIQTKRSFQY

NT seq 429 nt +upstreamnt +downstreamnt
atggcggctgggcttagtgaactgcgtgctgcagatgtggaagaggacgcgtcgcagctc
gtcttccccaaagagtttgaaaatgctgaaactctcttgaattcagaggtacatatgttg
ctggaacatcgtaagcagcagaatgagagtgctgaagatgagcaggagctctccgaggtc
ttcatgaaaaccttaaactatactgctcgcttcagccgtttcaagaatcgtgaaactatc
gctagtgtgcgcagtttgttgctccagaagaagctccataaatttgagttggcatgcttg
gctaacctctgcccagagacagctgaggaagccaaagctcttatacccagcctggaggga
cgttttgaggatgaagaattgcagcagatacttgatgacattcagacaaaacgaagcttc
cagtattag

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