Microcaecilia unicolor: 115479218
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Entry
115479218 CDS
T09142
Symbol
LSM8
Name
(RefSeq) LSM8 homolog, U6 small nuclear RNA associated
KO
K12627
U6 snRNA-associated Sm-like protein LSm8
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
muo03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
115479218 (LSM8)
09123 Folding, sorting and degradation
03018 RNA degradation
115479218 (LSM8)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115479218 (LSM8)
03041 Spliceosome [BR:
muo03041
]
115479218 (LSM8)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115479218 (LSM8)
mRNA degradation factors
5'-3' decay
Lsm complex
115479218 (LSM8)
Spliceosome [BR:
muo03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
115479218 (LSM8)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
RimP_C
Motif
Other DBs
NCBI-GeneID:
115479218
NCBI-ProteinID:
XP_030072906
UniProt:
A0A6P7Z8H9
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Position
10:complement(53086173..53098262)
Genome browser
AA seq
96 aa
AA seq
DB search
MTSALESYINRTVAVITSDGRMIVGTLKGFDQTINLILDESHERVFSSSQGVEQVVLGLY
IVRGDNVAVIGEIDEETDSALDLGSIRAEPLNAVIH
NT seq
291 nt
NT seq
+upstream
nt +downstream
nt
atgacgtcagctttggagagctacatcaatcggactgttgcagtaattacatctgatggc
agaatgatcgtgggaaccctgaaaggttttgaccagaccatcaacttgatcttggatgaa
agtcatgaacgagtatttagttcatctcaaggagtggaacaagtggtgttaggattatac
attgtgagaggagataatgtagctgttattggagagattgatgaagagacagattctgct
ctggacttggggagtattcgagcagaacctctcaatgctgttatacactga
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integrated database retrieval system
