Microcaecilia unicolor: 115480053
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Entry
115480053 CDS
T09142
Symbol
SYVN1
Name
(RefSeq) E3 ubiquitin-protein ligase synoviolin isoform X1
KO
K10601
E3 ubiquitin-protein ligase synoviolin [EC:
2.3.2.27
]
Organism
muo
Microcaecilia unicolor
Pathway
muo04120
Ubiquitin mediated proteolysis
muo04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
115480053 (SYVN1)
04120 Ubiquitin mediated proteolysis
115480053 (SYVN1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
muo04121
]
115480053 (SYVN1)
Enzymes [BR:
muo01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
115480053 (SYVN1)
Ubiquitin system [BR:
muo04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
115480053 (SYVN1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
zf-rbx1
zf-C3HC4_2
zf-RING_UBOX
zf-RING_16
zf-C3HC4_3
zf-RING_11
U-box_ZFPL1
zf-RING_5
zf_RING_Vps8_fungal
zf-ANAPC11
zf-RING-like
zf-RING_Vps41
FAR1_N
zf-HC5HC2H
zf-Nse
zf-C3H2C3
Endonuclease_7
Prok-RING_4
Motif
Other DBs
NCBI-GeneID:
115480053
NCBI-ProteinID:
XP_030074323
UniProt:
A0A6P7Z9U0
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All DBs
Position
11:complement(125059311..125132198)
Genome browser
AA seq
624 aa
AA seq
DB search
MFRTAALMAGSLALTAAVVAHAYYLKHQFYPTVVYLTKSSPSMAVLYIQAFVLVFMLGKF
MGKVFFGQLRAAEMEHLLERSWYAVTETCLAFTVFRDDFSPRFVALFTLLLFLKCFHWLA
EDRVDFMERSPNISVLFHFRITSLMLLLEILDFLFVSHAYHSILIRGASVQLVFGFEYAI
LMTMVLTVFIKYILHSVDLLRENPWDNKAVYMLYTELFTGFIKVLLYMAFMTIMIKVHTF
PLFAIRPMYLTMRQFKKAVTDAIMSRRAIRNMNTLYPDATPEELQAMDNVCIICREEMVT
GAKRLPCNHIFHTSCLRSWFQRQQTCPTCRMDVLRASLPTPSQPPQEQRQQDQAQQQPPH
TPLLPQPPNFPPGLLPPFPPGMFPFWPPMGPFPPVPGVAAPGNSENPPGADNIPSTSGTQ
ATSASSSRASDVAGGSEAANGTSSIPGFPFPPPWLAMSFPPPFGFPPMPVPPAGFAGLTD
EELRAMEGHERQNLEARLQCLQNIHTLLDAAMLQINQYLTVLATIGPPHSASTLQPSSTP
SPPESISGAVATSSAAEAVPLTTSPPPLTDSSTSEQTAVTESVGAEDVPIPAADEEDALH
EEPDAVELRRRRLQKLETHTAELH
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgtttcggactgcggcattgatggctggcagcctggcactgactgctgccgtggtagcc
catgcctattacttgaagcaccaattttacccaactgtggtgtacctgaccaagtccagt
cctagcatggcagtcctgtacatccaggcctttgttctggtttttatgctgggtaaattc
atgggcaaggtgttctttggtcagctacgagcagcagaaatggagcatctgttagagcgc
tcctggtatgcagtgacagagacctgcctcgcgtttacagtcttcagagatgacttcagc
cctcgctttgtagctctcttcaccctactcctcttcctcaagtgttttcactggttggct
gaggatcgtgttgactttatggaaagaagccctaacatttctgtcctctttcactttcgt
attacttcactgatgctgttgttggagatcctggactttctctttgttagtcatgcctac
cacagcattctcattcggggagcatctgtgcagctggtctttggctttgagtatgctatc
ctcatgaccatggtcctcactgtcttcatcaaatacatcctgcactctgtggacctgtta
cgggagaatccctgggacaacaaagcagtgtacatgttatacactgagctcttcacaggc
tttattaaagttctactctacatggcatttatgaccatcatgattaaagtgcacaccttt
ccattgtttgccattcgacccatgtacttgaccatgaggcaatttaaaaaagcagtgacg
gatgccattatgtcacgacgggccattcgcaacatgaacacactgtacccagatgctact
ccagaggagctgcaagccatggacaatgtttgtatcatctgtcgtgaagagatggttact
ggagcaaagcgcctgccatgcaatcacatctttcacaccagctgtctgcggtcttggttc
cagcgccaacaaacatgccccacctgcaggatggatgtcctacgtgcctccctgcccacc
ccatcccaaccacctcaggaacagcggcagcaggatcaagcacaacagcagccaccccat
acccctctgcttccccaacctcctaattttccaccaggactcctccctccattccctcct
gggatgtttcctttttggcctcccatgggtccttttcctcctgtccctggtgtcgcagca
cctggtaattctgagaatccacctggagcagataacataccatctacatcaggcacccaa
gccacttctgccagctcttcaagagccagtgatgtcgcaggaggatccgaggctgcaaat
gggacatcttctattcctgggtttcccttccctcccccatggctggcgatgtcctttccc
cctccatttggctttcctcccatgccagtgccacctgctggttttgcaggactgacggac
gaggagctacgggctatggagggccatgagcgtcagaatctggaggctcggctgcagtgc
ttgcagaacattcacacactgctagatgctgccatgctgcagatcaaccagtacctgaca
gtgctggccaccattgggcccccccatagtgcctctaccctgcaaccctcctctacgcca
agtccaccagagtccatttcaggtgctgtggccacctcaagcgcagctgaagccgtgcct
ctcaccacatctcctccaccgctaactgactcgtccacatcagaacaaacagcagtgacc
gaatcagttggtgcagaagatgtacccattccagcagcagatgaggaggatgcccttcat
gaagaacctgatgctgtagagctgcgcaggcgccggcttcaaaaactggaaacacatact
gctgagctccattga
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