Microcaecilia unicolor: 115480059
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Entry
115480059 CDS
T09142
Symbol
SMARCB1
Name
(RefSeq) SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1 isoform X1
KO
K11648
SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1
Organism
muo
Microcaecilia unicolor
Pathway
muo03082
ATP-dependent chromatin remodeling
muo03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09126 Chromosome
03082 ATP-dependent chromatin remodeling
115480059 (SMARCB1)
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
115480059 (SMARCB1)
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
muo01009
]
115480059 (SMARCB1)
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
muo03021
]
115480059 (SMARCB1)
03036 Chromosome and associated proteins [BR:
muo03036
]
115480059 (SMARCB1)
Protein phosphatases and associated proteins [BR:
muo01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-1
PP1-interacting proteins (PIPs)
115480059 (SMARCB1)
Transcription machinery [BR:
muo03021
]
Eukaryotic type
RNA polymerase II system
Coactivators
BAF/PBAF complex
115480059 (SMARCB1)
SWI/SNF complex
115480059 (SMARCB1)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Chromatin remodeling factors
BAF complex
115480059 (SMARCB1)
PBAF complex
115480059 (SMARCB1)
SWI/SNF complex
115480059 (SMARCB1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF5
INI1_DNA-bd
DUF1679
Motif
Other DBs
NCBI-GeneID:
115480059
NCBI-ProteinID:
XP_030074341
UniProt:
A0A6P7ZCV8
LinkDB
All DBs
Position
11:59281077..59329517
Genome browser
AA seq
384 aa
AA seq
DB search
MIMALSKTFGQKPVKFQLEEDGEFFMIGSEVGNYLRMFRGSLYKRYPSLWRRLATVEERK
KIVASSHGKKYHGYTTLATSVTLLKASEVEEILDGNDEKYKAVSISTEPPTYLREQKAKR
NSQWVPTLPNSSHHLDAVPCSTTINRNRMGRDKKRTFPLCFDDHDPAVIHENASQPEVLV
PIRLDMEIDGQKLRDAFTWNMNEKLMTPEMFSEILCDDLDLNPLTFVPAIASAIRQQIES
YPTDSILEDQSDQRVIIKLNIHVGNISLVDQFEWDMSEKENSPEKFALKLCSELGLGGEF
VTTIAYSIRGQLSWHQKTYAFSENPLPTVEIAIRNTGDADQWCPLLETLTDAEMEKKIRD
QDRNTRCHRRFIRFSFRASRRGRL
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
atgataatggcgttgagtaaaacgttcggccaaaagccggtgaagttccagctggaggag
gatggggagttcttcatgatcggctccgaggtgggaaactatttgcgtatgttcagaggt
tctctgtataagaggtacccatctctttggagacggctagcaacagtggaggaaaggaaa
aaaatagtagcctcatctcatggaaaaaaataccatggatacacaacattggccacaagt
gtaaccctcttgaaagcctcagaagtagaggagatcttggatgggaatgatgagaaatac
aaggcagtatccatcagcactgaacctccaacctacctcagagagcagaaggcaaagagg
aatagccaatgggttccaactctaccaaatagctcccaccatcttgatgctgtgccctgc
tcaacaaccatcaacaggaaccgcatggggagggacaagaagaggacattccccctctgt
tttgatgaccacgaccctgcagtgattcatgaaaatgcttcccagcctgaggttctggtt
cccatcagacttgatatggaaattgatgggcagaagctacgagatgcctttacatggaac
atgaatgagaagctaatgaccccagaaatgttttcagagattctgtgtgatgacctggat
ttgaaccctctgacctttgtccctgctatcgcttctgccatccggcagcaaattgagtcc
tatcccactgatagtatcttagaggaccaatctgatcagcgggtcattattaagctaaat
atccatgttggaaacatttctctggtggaccagtttgagtgggacatgtctgagaaggag
aactctcctgagaagtttgccctgaagctgtgttcagaattagggctaggtggggagttt
gtcaccaccattgcttacagcatccgagggcaactgagttggcatcagaagacgtatgct
ttcagtgagaacccactgccaactgtagagattgcaatccggaatacaggcgatgcagac
cagtggtgccccctcttggaaactttgactgatgcggagatggagaagaagattcgtgac
caggacaggaacaccaggtgccatcgtcgtttcatacgcttttccttccgggcatcgcgc
cggggtagactataa
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