Microcaecilia unicolor: 115480310
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Entry
115480310 CDS
T09142
Name
(RefSeq) LOW QUALITY PROTEIN: polyadenylate-binding protein 4-like
KO
K13126
polyadenylate-binding protein
Organism
muo
Microcaecilia unicolor
Pathway
muo03015
mRNA surveillance pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
115480310
09123 Folding, sorting and degradation
03018 RNA degradation
115480310
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115480310
03041 Spliceosome [BR:
muo03041
]
115480310
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
eIF4F and regulatory proteins
115480310
mRNA cycle factors
Stress granule specific factors
115480310
Spliceosome [BR:
muo03041
]
Complex C
Other components
Complex C specific factors
115480310
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
MLLE
RRM_5
RBD_DEAH11
RRM_occluded
RBD_RDR6
RRM_10
RRM_7
RRM_3
POP1_C
Motif
Other DBs
NCBI-GeneID:
115480310
NCBI-ProteinID:
XP_030074757
UniProt:
A0A6P7Z5Y5
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All DBs
Position
11:complement(207731509..207753762)
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AA seq
606 aa
AA seq
DB search
MLYEKFSPAGPVLSIRVCRDMITRRSLGYAYVNFQQPADAERALDTMNFDVIKGKPIRIM
WSQRDPSLRKSGVGNVFIKNLDKSIDNKALYDTFSAFGNILSCKVVCDENGSKGYAFVHF
ETQDAADRAIEKMNGMLLNDRKVFVGRFKSQKEREAELGARAKEFTNVYIKNFGDDMDDE
RLKEMFSKYGKTLSVKVMTDSTGKSKGFGFVSFEKHEDANKAVEEMNGKDINGKMVFVGR
AQKKVERQAELKRKFEQLKQERISRYQGVNLYIKNLDDTIDDEXLRKEFSPFGSITSAKV
MLEEGRSKGFGFVCFSSPEEATKAVTEMNGRIVGSKPLYVALAQRKEERKAHLTSQYMQR
IAGMRALPASTIINQFQPAAGGYFMPAVPQTQSRPAYYAPNQMAQIRPNPRWQQGGRPQA
GFQGMPNLMRQSGPRPTLRHLGPSASTQGSRSLLSTTHRGGVTPGTQNLVPRTAVAIPPP
RAVPPYKYSPSARSPHPAVQPLQAPQPAVHVQGQEPLTASMLAAAPPQEQKQMLGERLFP
LIQGMHPSLAGKITGMLLEIDNSELLHMLESPESLRSKVEEAVAVLQAHQAKKEAAQKVG
VVTATS
NT seq
1821 nt
NT seq
+upstream
nt +downstream
nt
atgttgtacgagaagttcagtccggcgggacctgtgctgtccatccgcgtctgcagggac
atgatcacccgcaggtcgctgggctatgcctacgtcaacttccagcagccggccgacgcg
gaacgtgctctggacaccatgaattttgatgtgataaaaggcaaacccattcgtatcatg
tggtctcagcgtgatccttccctgaggaaatcgggggttggcaatgtcttcatcaagaat
ttggacaagtccatagacaataaagcactttatgacaccttctctgcatttgggaacatt
ctgtcctgcaaggtggtgtgtgatgagaatggctctaaaggctatgcctttgtacacttt
gagacccaggatgcagcagacagagcgattgagaaaatgaatggcatgctgctaaatgac
cgtaaggtctttgttggacgctttaagtctcaaaaagagcgggaggcggagctgggagca
agagcaaaggaattcacaaatgtttacatcaagaactttggagatgacatggatgacgag
agactgaaggagatgttcagcaaatatgggaagactctgagtgttaaagtgatgacagat
tccactggtaaatccaaaggttttggctttgtcagttttgagaagcatgaggatgccaac
aaggctgtggaggagatgaatggaaaggacatcaatgggaaaatggtgtttgtgggccgt
gctcaaaaaaaggtggagcgtcaggcagaactgaaaaggaagtttgagcaactgaaacag
gagagaatcagcaggtaccagggtgtgaatctgtacattaagaacctggatgacaccatt
gatgatgaanaattgaggaaagagttctctccgtttggctctattaccagtgccaaggtg
atgctagaagagggacggagtaaaggctttggatttgtgtgtttctcctcaccggaagag
gccaccaaagctgtcacagagatgaatggacgcattgtgggttctaagcccctctatgtg
gcactagcgcaaaggaaagaggagaggaaggcacatctcaccagtcagtacatgcagcgc
attgcaggcatgagagccttgcctgcaagcaccatcatcaaccagttccagccagctgct
gggggatacttcatgccagcagtgcctcagactcaaagcagacctgcttactatgcaccc
aaccagatggctcaaataagaccgaatccacgttggcaacaggggggaagacctcaggct
gggttccagggcatgccaaacttaatgcgccagagtgggccaagaccaacgctgcgtcat
ctgggaccatctgccagcacccagggctcccggagccttctgagtactacacacagaggc
ggagtcacccctggtactcagaaccttgttcctcgtacagcagttgctattccacctccc
cgggcagttcctccctacaagtacagccctagtgctcggagtccccacccagcagtgcag
cctttgcaggcgcctcagcctgctgtccatgtgcagggacaggagcccctgacagcttcc
atgctggctgccgccccaccacaggaacagaaacaaatgttgggggaacgcttgtttcca
ctgatccaaggtatgcaccccagcttagctgggaagatcacaggaatgctgctagagata
gataactctgagttattgcacatgctggagtcaccagaatctctccgctcaaaggtggag
gaagctgtggctgtgttacaagctcatcaggctaaaaaggaagctgcccaaaaggtgggc
gtggtcactgctacctcttaa
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