Microcaecilia unicolor: 115480607
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Entry
115480607 CDS
T09142
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
KO
K10756
replication factor C subunit 3/5
Organism
muo
Microcaecilia unicolor
Pathway
muo03030
DNA replication
muo03410
Base excision repair
muo03420
Nucleotide excision repair
muo03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
115480607 (RFC5)
03410 Base excision repair
115480607 (RFC5)
03420 Nucleotide excision repair
115480607 (RFC5)
03430 Mismatch repair
115480607 (RFC5)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
muo03032
]
115480607 (RFC5)
03036 Chromosome and associated proteins [BR:
muo03036
]
115480607 (RFC5)
03400 DNA repair and recombination proteins [BR:
muo03400
]
115480607 (RFC5)
DNA replication proteins [BR:
muo03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
115480607 (RFC5)
DNA Replication Termination Factors
ELG1-RFC complex
115480607 (RFC5)
Chromosome and associated proteins [BR:
muo03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
115480607 (RFC5)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
115480607 (RFC5)
Check point factors
HRAD17(Rad24)-RFC complex
115480607 (RFC5)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
RCF1-5-like_lid
AAA_24
AAA_11
AAA_22
AAA_assoc_2
RuvB_N
AAA_16
AAA_14
DEAD
ResIII
DUF815
AAA_7
PhoH
ATPase_2
AAA_30
AAA_5
AAA_19
TIP49
AAA_2
DNAX_ATPase_lid
Mg_chelatase
Torsin
Thioredoxin_6
Motif
Other DBs
NCBI-GeneID:
115480607
NCBI-ProteinID:
XP_030075274
UniProt:
A0A6P7ZJP6
LinkDB
All DBs
Position
11:complement(4941060..5043163)
Genome browser
AA seq
331 aa
AA seq
DB search
MASTSRIPRNLPWVEKYRPQKLNDLISHQDILSTIQRFISEDKLPHLLFYGPPGTGKTST
ILACAKQLYRDKEFSSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDEADA
MTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEYV
IEQEGVDISSDGMKALVTLSSGDMRRALNILQSTNMAYGKVTEDTVYTCTGHPLKADIAN
ILDWMLNKDFTTAYKNILNLKTLKGLALHDILTEVHLFVHRVDFPPSVRIHLLRKMADIE
YRLASGTSEKIQLSSLIAAFQVTRDMIAAEA
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcgtccacaagcagaattccccgaaatcttccttgggtggagaaatatcgacctcag
aaactgaatgatttgatctctcatcaggacatcctgagcacaattcagaggttcattagt
gaagacaaactgcctcacctactattctatggtccccctggcactgggaaaacctccact
atcctggcttgtgcgaagcagctttacagagacaaggaattcagctccatggtgctggag
ttgaatgcttctgatgacagagggatagacgttgtccgaggacccatactcagctttgcc
agcacaaggaccatatttaaaaaaggttttaagcttgtgatcttggatgaagcagatgct
atgacccaggatgcccagaacgcactgagaagagtgatagagaaattcacagaaaacacc
aggttctgcctgatctgcaattatttgtcgaagattatcccagcgttgcagtcccggtgt
acacggttccgctttggcccactgactccagagcttatggtaccacggctggagtatgtc
atagaacaggaaggagttgacatcagttctgatggcatgaaggctttggtgacgctttct
agcggagacatgcgcagagctctgaatattttacagagcacaaacatggcatatgggaag
gtgactgaagacacagtgtacacctgcacagggcatccactgaaagctgacattgccaac
attcttgattggatgctgaacaaggacttcaccactgcctataaaaatatcttgaatctg
aagaccctgaaggggctggccttgcatgatattctgacagaagttcacctgtttgtacac
cgagttgattttccaccttcagtccgaatccatttactaaggaagatggcggacattgag
tacagactggcctcggggacaagtgagaagatccaattgagctcccttattgctgccttt
caggtcactcgagatatgattgcagctgaagcttaa
DBGET
integrated database retrieval system