KEGG   Microcaecilia unicolor: 115480607
Entry
115480607         CDS       T09142                                 
Symbol
RFC5
Name
(RefSeq) replication factor C subunit 5
  KO
K10756  replication factor C subunit 3/5
Organism
muo  Microcaecilia unicolor
Pathway
muo03030  DNA replication
muo03410  Base excision repair
muo03420  Nucleotide excision repair
muo03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:muo00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    115480607 (RFC5)
   03410 Base excision repair
    115480607 (RFC5)
   03420 Nucleotide excision repair
    115480607 (RFC5)
   03430 Mismatch repair
    115480607 (RFC5)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:muo03032]
    115480607 (RFC5)
   03036 Chromosome and associated proteins [BR:muo03036]
    115480607 (RFC5)
   03400 DNA repair and recombination proteins [BR:muo03400]
    115480607 (RFC5)
DNA replication proteins [BR:muo03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    115480607 (RFC5)
  DNA Replication Termination Factors
   ELG1-RFC complex
    115480607 (RFC5)
Chromosome and associated proteins [BR:muo03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    115480607 (RFC5)
DNA repair and recombination proteins [BR:muo03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     115480607 (RFC5)
  Check point factors
   HRAD17(Rad24)-RFC complex
    115480607 (RFC5)
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_24 AAA_11 AAA_22 AAA_assoc_2 RuvB_N AAA_16 AAA_14 DEAD ResIII DUF815 AAA_7 PhoH ATPase_2 AAA_30 AAA_5 AAA_19 TIP49 AAA_2 DNAX_ATPase_lid Mg_chelatase Torsin Thioredoxin_6
Other DBs
NCBI-GeneID: 115480607
NCBI-ProteinID: XP_030075274
UniProt: A0A6P7ZJP6
LinkDB
Position
11:complement(4941060..5043163)
AA seq 331 aa
MASTSRIPRNLPWVEKYRPQKLNDLISHQDILSTIQRFISEDKLPHLLFYGPPGTGKTST
ILACAKQLYRDKEFSSMVLELNASDDRGIDVVRGPILSFASTRTIFKKGFKLVILDEADA
MTQDAQNALRRVIEKFTENTRFCLICNYLSKIIPALQSRCTRFRFGPLTPELMVPRLEYV
IEQEGVDISSDGMKALVTLSSGDMRRALNILQSTNMAYGKVTEDTVYTCTGHPLKADIAN
ILDWMLNKDFTTAYKNILNLKTLKGLALHDILTEVHLFVHRVDFPPSVRIHLLRKMADIE
YRLASGTSEKIQLSSLIAAFQVTRDMIAAEA
NT seq 996 nt   +upstreamnt  +downstreamnt
atggcgtccacaagcagaattccccgaaatcttccttgggtggagaaatatcgacctcag
aaactgaatgatttgatctctcatcaggacatcctgagcacaattcagaggttcattagt
gaagacaaactgcctcacctactattctatggtccccctggcactgggaaaacctccact
atcctggcttgtgcgaagcagctttacagagacaaggaattcagctccatggtgctggag
ttgaatgcttctgatgacagagggatagacgttgtccgaggacccatactcagctttgcc
agcacaaggaccatatttaaaaaaggttttaagcttgtgatcttggatgaagcagatgct
atgacccaggatgcccagaacgcactgagaagagtgatagagaaattcacagaaaacacc
aggttctgcctgatctgcaattatttgtcgaagattatcccagcgttgcagtcccggtgt
acacggttccgctttggcccactgactccagagcttatggtaccacggctggagtatgtc
atagaacaggaaggagttgacatcagttctgatggcatgaaggctttggtgacgctttct
agcggagacatgcgcagagctctgaatattttacagagcacaaacatggcatatgggaag
gtgactgaagacacagtgtacacctgcacagggcatccactgaaagctgacattgccaac
attcttgattggatgctgaacaaggacttcaccactgcctataaaaatatcttgaatctg
aagaccctgaaggggctggccttgcatgatattctgacagaagttcacctgtttgtacac
cgagttgattttccaccttcagtccgaatccatttactaaggaagatggcggacattgag
tacagactggcctcggggacaagtgagaagatccaattgagctcccttattgctgccttt
caggtcactcgagatatgattgcagctgaagcttaa

DBGET integrated database retrieval system