Microcaecilia unicolor: 115480892
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Entry
115480892 CDS
T09142
Symbol
DDX55
Name
(RefSeq) ATP-dependent RNA helicase DDX55 isoform X1
KO
K14809
ATP-dependent RNA helicase DDX55/SPB4 [EC:
5.6.2.7
]
Organism
muo
Microcaecilia unicolor
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
muo03009
]
115480892 (DDX55)
Enzymes [BR:
muo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
115480892 (DDX55)
Ribosome biogenesis [BR:
muo03009
]
Eukaryotic type
Pre-60S particles
Helicases
115480892 (DDX55)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
CTE_SPB4
CTT_SPB4
ResIII
AAA_15
SBF_like
Helicase_C_2
Cas3-like_C_2
AAA_22
Spem1
Motif
Other DBs
NCBI-GeneID:
115480892
NCBI-ProteinID:
XP_030075722
UniProt:
A0A6P7Z8N8
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All DBs
Position
11:40617156..40645383
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AA seq
590 aa
AA seq
DB search
MMEGSWESLSVGLHENVLQTLRELCFTHMTPVQSAAIPLFMSNKDIAAEAITGSGKTLAF
VIPLLEILLRREEKLKKMQVGAIIITPTRELAIQINEVLSHFTKHFPQLSQILLIGGSNP
AEDVERFKEHGGNIIVATPGRLVDMFRRKADGLHLASCVKALDVLVLDEADRLLDMGFEA
SLNTILEFLPKQRRTGLFSATQTQEVENLVRAGLRNPVRITVKEKGVAASSCQKTPTRLQ
NYYMTCKADEKFNYLVAFLRQRKQEKHLIFFSTCACVEFYGKALESFIKNVKIMCIHGKM
KHKRSKIFTEFRQLPSGILVCTDVMARGIDIPEVNWVLQYDPPSSASSFVHRCGRTARIG
HHGSALVFLLPMEESYINFLSINQKCPMQEMKPLKISIDLLPKLKSLALADRAMFEKGMK
AFVSYVQAYAKHECSLIFRVKDLDFASLAQGFGLLKMPKMPELRGKNFSDFTPTIIDTDS
IAYKDKNREKQRQKLLEEHKKQQRECRGQKKFCKNKAWSKQKAKKEKKKKKVAEKRKRDE
DFEMEEEDLDDLLNDTRLLKKLKRGKISEDEFEKRFLHSKRKVEDEDTDD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatggagggctcctgggagagtttgtcggttgggctgcatgaaaatgtcctgcagaca
ctgcgggaactgtgctttactcacatgacgccagtgcagtctgcagctatccctttattt
atgagcaataaagacattgcagctgaagcgataactggcagtggcaaaacattagctttt
gtaattcccttgttggagattcttttaaggcgggaagaaaaattaaagaaaatgcaggtt
ggagccattatcataactcccacaagggaacttgcgattcagatcaatgaggtcctctca
catttcacaaaacatttcccccagttaagtcagatacttctaattggtggtagtaatcca
gcagaagatgtagaaaggtttaaggaacatggtggaaacatcattgttgccacaccaggt
cgcttggtggacatgttcagaagaaaagcagatggattgcatttggcgagttgtgtgaaa
gcgttggatgtcctggttctggatgaggcagatagacttctggacatggggtttgaagcc
agtttaaataccatcctggagttcctacccaagcagaggcgaacaggcttattctcagct
actcaaacccaggaagttgagaacctggtaagagcaggtctacggaatccagtacgcatt
acagtgaaggagaaaggggtggccgcaagtagctgtcagaagacacccactcgccttcag
aactactacatgacatgcaaagcagatgaaaaatttaactaccttgtggccttcctccgc
cagcgcaagcaggaaaaacatctcatcttcttcagtacatgtgcttgtgtggaattttat
gggaaagccttagagagcttcataaaaaatgtgaaaatcatgtgcattcatggaaaaatg
aaacacaaacggagcaagatttttactgaatttcggcagttgccaagtggaattttagtg
tgcactgatgtgatggcacgtggcatagacattccagaggtaaactgggttttgcagtac
gaccctccgagcagtgccagttcctttgttcatcgatgtggaaggacagccagaatcggc
catcacggcagtgctcttgtgttcttacttccaatggaagagtcctacatcaatttcctc
tccataaaccaaaaatgtcccatgcaggaaatgaaaccgctgaaaatctcaatagatctt
cttccgaagctgaaatctttggctttagctgatagagctatgtttgagaaaggaatgaaa
gcgtttgtgtcttacgtacaggcttacgcaaaacacgaatgcagtcttatcttcagagtc
aaagatcttgactttgccagtctggcacaaggatttggattgctgaagatgccaaaaatg
ccagaactgagagggaagaatttttctgactttactcccaccatcattgacacagactcc
attgcatacaaagataaaaacagagaaaaacagaggcagaagctgttagaagagcacaag
aagcaacagcgagagtgcagagggcaaaagaaattctgcaagaacaaagcttggtcaaaa
cagaaagccaaaaaagaaaagaagaagaagaaggttgctgagaaaaggaagcgagatgag
gactttgagatggaagaggaggacctggatgatctactaaatgacacaagacttttgaaa
aaactcaagcgaggtaaaatcagtgaggatgagtttgagaagcggtttttacacagtaaa
aggaaggtagaggatgaagacacggatgactga
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