Microcaecilia unicolor: 115481802
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Entry
115481802 CDS
T09142
Symbol
PATL1
Name
(RefSeq) protein PAT1 homolog 1 isoform X1
KO
K12617
DNA topoisomerase 2-associated protein PAT1
Organism
muo
Microcaecilia unicolor
Pathway
muo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
115481802 (PATL1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
muo03019
]
115481802 (PATL1)
Messenger RNA biogenesis [BR:
muo03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
115481802 (PATL1)
mRNA degradation factors
5'-3' decay
Decapping complex
115481802 (PATL1)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PAT1
Motif
Other DBs
NCBI-GeneID:
115481802
NCBI-ProteinID:
XP_030077055
UniProt:
A0A6P7ZV80
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Position
1:634755397..635048018
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AA seq
774 aa
AA seq
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MYQYESLEDCPLDEDEDTFQILREEDEDIDQFNDDTFGAGAVDDWQEEHDRLTELEDKTQ
SEQQQATCGPLLNNNAPLQDEGDFLGDHEENLAESLSKLVIDSELEDPAIMGAIHSRPSL
QLTKGLNSIWDGPVVLRCLQTPVLREEVTPVSIMKEYGLVEKPQPDQEQPELDLSECVLP
RRSSSPIIGSPPVRAVPIGTPPKQVAMSGFSQQQQVLCPKAVHIRAPLQQRFPPASYNDQ
MSPNQLCTVSSASLLGHSFPPTGTSVLAQFQRAQQAAAAAGRMSPSQFACVSGLVGPPLA
SVNPKLLQSRVGSMMSAATGFRPFFGAPTPLASSASPASHLQNLRPQPQMFRADTTHLHP
QHRRILHQRQLQNRNQHKNLNGIGGDQTHRGSHQDHLKKDPYANLMMQREKDWVSKIQMM
QLQSTDPYLDDYYYQNYFEKLEALSAAKITPGEGPKKERTKLITPQMAKFEHDYKPVQFA
GSLGKLTVSSVNNPRKMIDAVVTLRSEDDESKEKQVRDKRRQTLFIIEKTFSLLLDVEDY
ERRYLQSLDSERPALIEDRKQKILEIYENLRGNVACNERLNEDHFVQIMCIRKGKRMVAR
VLPYLSVQHAATLLRAIAHNLPFIIKKDIQDEILPCLVRPCALLLGHFSSQVVISLLQHL
TNLPQNSTCITQTEPPNPHLTAVLQNKFGLTLLYQILARGEHILNSAASTDLLQDNQWTD
LVFRVTRELLGIPSASLAKPVCTPSNLLSLFSRYVDTQHLNVLETKLKLVPGTR
NT seq
2325 nt
NT seq
+upstream
nt +downstream
nt
atgtaccaatacgagtccttggaggactgtcctttagatgaggatgaagacacctttcag
attcttagagaggaagatgaagatattgaccagtttaatgatgatacctttggagctggt
gctgttgatgattggcaagaagagcatgaccgactgactgagctggaagacaagacccag
tctgagcagcagcaagcaacctgtgggccactgctgaacaacaatgctccactccaagat
gagggggattttttgggggaccatgaagaaaatctggcagagagtctgagcaagcttgtg
atcgacagtgagctagaagatcctgccatcatgggtgccatccattctcgaccttccttg
cagttaactaaaggtttgaacagcatttgggatgggccagttgtgctgcggtgtctgcaa
acgcctgtgctaagggaggaggtaacacctgtgtccatcatgaaggagtatggcctagtt
gagaagccgcagcctgaccaggaacagcctgaactagatctttcagaatgtgtcctgccc
agacgctcttcttctcccatcattggcagtcctccggtccgagcagttcctattggcaca
ccacctaagcaagtggctatgtctggcttcagtcagcagcagcaggtattgtgccccaag
gctgttcacatccgagcaccactgcagcagcgcttcccacctgcatcctacaatgatcag
atgtctcctaaccagctctgtactgtttcgagtgcttcactgttgggccactcttttcct
cctactggcacatctgtcctcgcacagttccagcgagcgcagcaggcagcagctgcagca
ggacggatgtctcccagtcagtttgcttgtgtctctggcttggtgggcccccctcttgct
tctgtgaaccccaagctcttacagagcagagttggatcaatgatgtcagcagccacaggt
ttccgacctttctttggagctcccactcccctagcatcctctgcttctccagcatcacat
ctgcaaaatctgaggcctcaacctcagatgtttcgagcagatacaacacacctacatcct
cagcatcgacgcattttacatcagagacagctgcagaataggaaccagcacaagaatctg
aatgggattgggggagaccagactcaccggggatcccatcaggaccacctgaagaaggac
ccctatgccaacttgatgatgcagagggaaaaggactgggtgtctaagattcagatgatg
caacttcaaagtactgacccttacctggatgattattactatcagaactattttgagaag
ttagaagcactgtcagcagctaagatcacacctggagagggcccaaagaaagagaggact
aaacttatcacaccccaaatggccaaatttgagcatgattacaagccagtgcagtttgca
gggtccttggggaagcttacagtttccagtgtgaacaatcctagaaagatgattgatgcc
gtggtgacattgcgaagtgaagatgatgagtcaaaggaaaaacaagtacgggacaaaaga
cgtcaaactcttttcatcattgagaaaacattctccctccttctggatgttgaggactat
gagagacgttatctacagagtcttgactcggaacgccctgctctgatagaggataggaaa
cagaagatattggagatttatgagaatctaagagggaatgttgcctgtaatgagaggttg
aatgaggatcactttgtgcaaatcatgtgcatccggaaagggaagcgcatggttgcgcgg
gttctaccttacctctctgttcagcatgcagccaccctactcagagctattgcacataac
ctacccttcattatcaagaaagacatccaggatgagattctaccgtgcctagtaagacct
tgtgctcttcttctgggtcatttttcatcacaggtagtgatcagcctcttgcagcatcta
actaacttacctcagaattccacctgtattactcagactgaaccaccaaatcctcatctt
acagctgtgctccagaacaagtttggattaacactgttataccagatcttggctcgaggt
gagcacattctgaattctgcagcctcaacagacttactgcaggacaatcaatggacagat
ttggtttttagagtgactcgagagcttcttggtatcccctcagcatctcttgctaagcca
gtctgtaccccatccaatcttctctctctgttctccagatatgttgacacacagcatctc
aatgtgctagaaacaaaactcaaattagtgcctggtacacgatag
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