Microcaecilia unicolor: 115482420 Help Entry 115482420         CDS       T09142                                  Symbol PRPF19 Name (RefSeq) pre-mRNA-processing factor 19   KO K10599   pre-mRNA-processing factor 19 [EC:2.3.2.27] Organism muo  Microcaecilia unicolor Pathway muo03040   Spliceosome muo04120   Ubiquitin mediated proteolysis Brite KEGG Orthology (KO) [BR:muo00001]  09120 Genetic Information Processing   09121 Transcription    03040 Spliceosome     115482420 (PRPF19)   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     115482420 (PRPF19)  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03041 Spliceosome [BR:muo03041]     115482420 (PRPF19)    04121 Ubiquitin system [BR:muo04121]     115482420 (PRPF19)    03400 DNA repair and recombination proteins [BR:muo03400]     115482420 (PRPF19) Enzymes [BR:muo01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      115482420 (PRPF19) Spliceosome [BR:muo03041]  Complex B   Other components    Prp19 complex     115482420 (PRPF19)  Complex C    Prp19-CDC5 complex     115482420 (PRPF19) Ubiquitin system [BR:muo04121]  Ubiquitin ligases (E3)   U-box type E3    115482420 (PRPF19) DNA repair and recombination proteins [BR:muo03400]  Eukaryotic type   Other factors with a suspected DNA repair function    PSO4 complex     115482420 (PRPF19) BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40_Prp19 WD40 WD40_WDHD1_1st Prp19 WD40_CDC20-Fz Beta-prop_EML_2 WDR55 Beta-prop_WDR90_POC16_2nd WD40_MABP1-WDR62_2nd Beta-prop_TEP1_2nd EIF3I Beta-prop_CAF1B_HIR1 Beta-prop_EML Beta-prop_WDR75_1st ANAPC4_WD40 WD40_MABP1-WDR62_1st Beta-prop_IFT140_1st Beta-prop_EIPR1 Beta-prop_TEP1_C Beta-prop_SCAP Beta-prop_HPS5 NBCH_WD40 Beta-prop_Vps41 Beta-prop_IFT122_1st WDR90_beta-prop_4th PEP5_VPS11_N U-box Beta-prop_DCAF4 Beta-prop_WDR19_1st WD40_RFWD3 Beta-prop_RIG_2nd PROPPIN Beta-prop_SPT8 Cytochrom_D1 eIF2A Beta-prop_Nup120_160 RMC1_N Beta-prop_WDR35_TULP_N Beta-prop_DCAF12 zf-Nse Ge1_WD40 DUF1830 ATG16 Motif Other DBs NCBI-GeneID:  115482420 NCBI-ProteinID:  XP_030078029 UniProt:  A0A6P7ZVZ5 LinkDB All DBs Position 1:complement(645132089..645193300) Genome browser AA seq 504 aa AA seqDB search MSLICSISNEVPEHPCVSPVSNHVFERRLIEKYIAENGTDPVNNHPLSEEQLIDLKVAHP IRPKPPSATSIPAILKALQDEWDAVMLHSFTLRQQLQTTRQELSHALYQHDAACRVIARL TKEVTAAREALATLKPQAGLVVPQAAPAAQPAAVGAGEPMDLGELVGMTPEIVQKLQDKA TVLTTERKKRGKTVPEDLVKPEELNKYRQVSSHVGLHSASIPGILALDLCPSDTNKTLTG GADKNVVVFDKSSEQILATLKGHTKKVTSVVFHPSQELVFSASPDATIRIWSVPNASCMQ VVRAHESAVTGLSLHATGDYLLSSSDDQYWAFSDVHMGRVLTKVTDETSGCALTCAQFHP DGLIFGTGTMDSQIKIWDLKERTNVANFPGHSGPITSIAFSENGYYLATAADDSSVKLWD LRKLKNFKTLQLDDNFEVKSLTFDQSGTYLALGGTDVQVFICKQWTEVLHFTEHSGLTTG VAFGQHAKFVASTGMDRSLRFYSL NT seq 1515 nt NT seq  +upstreamnt  +downstreamnt atgtcccttatctgctctatttccaatgaggtcccagagcacccctgtgtgtctccagtg tccaatcatgtttttgagcggcgactgattgagaagtacattgcagagaatggcacagac ccagtgaacaaccatcccttgtcagaggagcagctaatagatctcaaagttgcccaccca atccgaccaaagccgccctctgccaccagtatcccagctatcctgaaggcactgcaagat gagtgggatgcagttatgcttcacagttttactctacggcagcagctgcaaacaactcgc caggagctctcgcatgccctctaccaacatgatgctgcttgccgtgtcattgcccgtctt accaaggaggtcaccgctgcaagagaggctttggcaactttgaaaccccaagctggcctt gtggttccacaggctgcacctgccgctcagcctgctgctgtgggagcaggagaaccaatg gacctgggagaactggtgggaatgacaccagagattgttcagaagctacaagacaaagct acggtgctgaccacggagcgtaagaagagaggaaagactgtccctgaggacttggtgaag cctgaggagctgaataagtaccgtcaggtgtcctcgcacgtggggctgcacagtgccagc attccaggaatccttgctttggacctctgcccctctgatactaacaagacgctgacaggt ggagcagataagaatgttgttgtatttgacaaaagttcagaacagattctggctaccctc aaaggtcacactaagaaggtcaccagtgtggtctttcacccctcccaggaactggtgttc tcagcttccccagatgctaccatccgtatctggtctgtgccgaatgcttcctgtatgcag gttgtccgtgcccatgagagtgctgtaacaggtctgagtttacatgccacaggagactac ctgctgagttcttctgatgatcagtactgggctttctcagatgtccatatgggacgtgtt ctgaccaaagtcacagatgaaacatctggctgtgctctcacctgtgcccagtttcaccct gatgggctcatttttggaacaggtaccatggactcacagattaagatttgggatttgaag gagcgcactaatgtggcgaatttcccaggacattctgggcccatcacaagcatcgccttc tcagaaaatgggtactaccttgctactgctgctgatgactcctctgttaaactctgggac ttgcgtaaactgaagaacttcaagaccctgcagctggatgataacttcgaggtgaaatca ctaacgtttgatcagagtggtacttacctggccctgggtggtaccgatgtccaggtcttc atctgcaaacagtggacagaggtccttcatttcacagaacacagtggcctgacaacagga gtggcatttggacagcatgccaagttcgtggcttcaacaggcatggaccgcagtttgcgc ttctacagcctgtga

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