Microcaecilia unicolor: 115482521
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Entry
115482521 CDS
T09142
Symbol
LIG3
Name
(RefSeq) DNA ligase 3
KO
K10776
DNA ligase 3 [EC:
6.5.1.1
]
Organism
muo
Microcaecilia unicolor
Pathway
muo03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
muo00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
115482521 (LIG3)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
muo03400
]
115482521 (LIG3)
Enzymes [BR:
muo01000
]
6. Ligases
6.5 Forming phosphoric-ester bonds
6.5.1 Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
6.5.1.1 DNA ligase (ATP)
115482521 (LIG3)
DNA repair and recombination proteins [BR:
muo03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Short Patch-BER factors
115482521 (LIG3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_N
LIG3_BRCT
zf-PARP
DNA_ligase_A_C
BRCT_2
RNA_ligase
Synaptonemal_3
mRNA_cap_enzyme
SDE2_2C
Motif
Other DBs
NCBI-GeneID:
115482521
NCBI-ProteinID:
XP_030078234
UniProt:
A0A6P7ZWB3
LinkDB
All DBs
Position
13:complement(5424398..5583090)
Genome browser
AA seq
1010 aa
AA seq
DB search
MPAFLKVLLWQSSRSFVSKTQCLQSLVQRYRVPSNNSFSQNSPRCTVKVLGGQPVKHKFF
SAFLVAGRNCASHPVLSPTSHSCSAPGDMAEQRYCADYARRGVARCRKCSEKIMKGMVRI
GKVVTNPFSESGGDMKEWYHVKCIFEKLEKARATTKKIEDITDLEGWEELQDPEKDLIKQ
HIKELSAKVGGTPKKKATVQTKLSPSGQLTSPSKISTATASPSPKKGSSFTAKPGDAPSG
ASSASSLSAKMCDPSHKDCLLREFRKLCTKVSDKPSYLAKTQLIQDFLQKGTGGDGFHGD
VYLTVKLLLPGVIKNVYNLNDKQIVKLFSKIFGCSQDDMVRDLEQGDVSETVRIFFEESK
SCPPAAKSLLTIQEVDDFLTRLSKLSKEDEQQKALEEVACRCTSNDLKCIIRLIKHDLKM
NSGAKHVLDALDPNAYDAFKASRNLHNVVERVLRNKKEAEKVPGLKRALSVQATLMTPVQ
PMLAEACKSIEHAMKKCPNGMYSEIKYDGERVQVHKNGDNFSYFSRSLKPVLSHKVAHFK
DFIPKAFPGGNSMILDSEVLLIDTNTGKPLPFGTLGVHKKAAFKDANVCLFVFDCIYFNG
VSLMDRPLHERRKFLHDNMVEIPNRILFSEMKHVTKASDLSDMISHVISEGLEGLVLKDL
KSIYEPGKRHWLKVKKDYLNEGAMADTADLSVLGAFYGQGSKGGMMSVFLMGCYDPSSQK
WCTVTKCSGGFDDATLARLQKELDMVKISKDASKIPDWLKINKNYYPDFIIQNPKKAPVW
EITGAEFSKSESHTADGISIRFPRCTRIRDDKNWKTATNLQQLKELFQLSKEKSDFIVTA
SSSHDEDGSSKSNSGQNGSASHSNNKPAATISPDKAKKQNGNPLSRKSEVQQKAEKRRAV
ASPTDHTMKKARSSDTGPSNGDSRLQSISSPKTLLNIFTGVKLYLSPSLDDFSKIRRYFL
AFDGDLVQEFDIHSATHVMSNMTDGTLDVKHVTPKWIWECIRKRKLVVPR
NT seq
3033 nt
NT seq
+upstream
nt +downstream
nt
atgcctgcttttctgaaggtgctgctctggcagtcttcaagatcatttgtctcaaagacc
cagtgcctacagtccctggtacagcgctatcgagtgccatcgaacaacagcttttctcaa
aactccccccgctgcacagtgaaggtattgggaggccagcctgtaaaacacaagtttttt
tccgcatttcttgttgctggtagaaattgtgcatcccacccagttctttctcccacatcc
cactcctgtagtgccccaggagacatggcagagcaaaggtactgtgcggactatgccagg
cgtggtgtggcacgctgcagaaagtgcagtgagaagatcatgaaaggcatggtgcgtatt
ggaaaggttgtgactaacccttttagtgagtctggtggagacatgaaggaatggtaccat
gtgaaatgtatctttgagaagctggagaaggcgcgagcaaccaccaagaagatcgaagac
attacagatctagaaggctgggaagagttacaggatcctgaaaaggatttaataaagcag
cacattaaagagctgagtgccaaggtgggaggcacaccaaagaaaaaagctactgtgcag
accaagctctctcctagtgggcagctgacctctccctccaaaatatcaacagctacagcc
agtccctctcccaaaaagggttccagtttcacagctaagcctggagatgctccctctggt
gcttcctctgccagcagcctgtctgccaaaatgtgtgaccctagtcataaggactgtctg
ctgcgggagttccgaaagctctgcactaaggtatctgacaagcccagctacctggccaag
acgcagctcatccaggacttcctgcagaaaggaacgggaggcgatggcttccatggtgat
gtgtacttgactgtgaagctgcttttgccaggtgttatcaagaatgtttacaatctgaat
gacaagcagatcgtgaagctgtttagcaagatctttggatgcagccaggatgatatggtg
cgcgatcttgagcagggtgatgtctcggagacggtgcgtattttctttgaagaaagtaag
tcttgccccccagcagctaagagcctgctcaccatccaggaagtggatgacttcctgacc
cgactgtcaaagctctctaaggaagatgagcagcaaaaggcgttggaggaagttgcctgc
aggtgcacatcgaatgacttgaagtgtattatccgactgataaagcatgatctaaagatg
aactccggagctaaacatgtgttagacgctctggatccaaacgcctatgatgcttttaaa
gcctcacgaaacctacacaatgtggtggagcgagttttgaggaacaagaaggaggccgag
aaggtcccgggactgaaacgagcccttagtgtgcaagcaactctcatgactcctgttcaa
cctatgctggctgaagcatgcaagtccattgagcatgccatgaagaagtgtcccaatgga
atgtattctgaaatcaagtatgacggagagcgagttcaggtccataagaatggcgataac
ttcagctacttcagccgtagcctcaagccagtgctctcccataaagtggctcattttaag
gactttatcccaaaggcttttccaggaggaaacagcatgatcctggactctgaagtgctg
ctgatagataccaacacagggaagcccctgccctttggcacccttggagtacataagaaa
gctgcgttcaaggatgccaatgtctgcctgtttgtgtttgattgtatctacttcaatgga
gtcagtttgatggacaggcccctgcacgagcgaaggaagttcttgcatgataacatggtg
gaaatacccaaccggattctcttctcagagatgaaacatgtgactaaagcctcagatttg
tcagatatgatcagtcatgtcattagtgagggactggaaggacttgtgctgaaggatttg
aagagtatttatgaaccaggaaaacgccactggctgaaagtaaagaaggattatctgaat
gagggtgcaatggctgatacagcagatctttcagtgctaggagctttttatggacagggc
tctaaaggtggaatgatgtcagtctttctcatgggctgttatgatcccagtagtcaaaag
tggtgtacggtgaccaagtgttccggtggttttgatgatgccacacttgctcgcttgcag
aaggagctggatatggtgaagatcagcaaggatgcaagcaaaattccagactggttaaaa
attaataagaactattatccagactttattatccagaatccaaagaaagcaccagtgtgg
gagattactggagctgagttctcaaaatctgaatcacacactgcagatgggatctcaatc
cgctttcctcgctgtacccgcatccgtgatgataagaactggaagacagcaaccaacctc
cagcagctgaaggagctgttccagctgtccaaggagaaatctgacttcattgtaacagcc
agctcttcccatgatgaggatggctcatctaagagcaacagcggacagaatggaagtgct
tcacacagcaacaataagccagcagcaaccatctcccctgacaaagccaagaaacaaaat
ggtaatccactttccaggaaatcggaagtacagcagaaagcagaaaagaggagagctgta
gccagcccaactgatcacaccatgaaaaaggcaagaagttcagacaccggtcccagcaat
ggtgacagcagattgcaatctatttcatcaccaaagactctattgaatatattcactggc
gtgaaactgtacttgtcaccctctctggatgacttcagcaaaatccggcgctactttctt
gcttttgatggggacctggtccaagaatttgatattcactcagcaacgcatgttatgagc
aacatgacagatggaaccctggatgtgaagcatgtcacgccaaagtggatctgggagtgc
attcgcaaacgcaagctggttgtgccacgttag
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