Mucilaginibacter sp. PAMC 26640: A0256_04305
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Entry
A0256_04305 CDS
T04335
Name
(GenBank) DNA helicase UvrD
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Pathway
mup03420
Nucleotide excision repair
mup03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0256_04305
03430 Mismatch repair
A0256_04305
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mup03400
]
A0256_04305
Enzymes [BR:
mup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0256_04305
DNA repair and recombination proteins [BR:
mup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0256_04305
MMR (mismatch excision repair)
Other MMR factors
A0256_04305
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
PDDEXK_1
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
AAA_30
DUF3799
Dna2
Terminase_6N
VF530
Motif
Other DBs
NCBI-ProteinID:
AMR34424
LinkDB
All DBs
Position
complement(985925..989095)
Genome browser
AA seq
1056 aa
AA seq
DB search
MQPTLNKYNLKFREALAGLNPEQLAAVNKMDGPVLVVAGPGTGKTQILAARIGKILTDTD
AQPSEILCLTYTDAGAVAMRKRLFEFIGPDAYRINIYTFHAFCNEIIQENLDYFGKLNLE
SLSDLESAMLFRELVDEFGKDHLLKRFTGDIYYDAPRLKSLFSTMKRENWTKDMIVQAVQ
EYLDDLPNREEFVYKRANAKAGIKIGDPKQKDIDKAKDTMAKLLAAVGEYDNYTGKMKAK
SFYDYDDMIIWVLKAFRENDEILRKYQERYQYILVDEFQDTSGSQNELLKFLLNYWETPN
VFVVGDDDQSIFKFQGANMKNILDFAGDYVDTLHTVVLKHNYRSNQHILDISGALINNNR
ERLTSQLKLDKNLKASHPRFDKLVIEPTIQEYENPAQELVNVALQIKQLVADGTQPGEIA
VIYRNHSQVEELLTYLEAQKIAVNTKRKIDILTVPFGEKIVNILRYLAMELDSPYSGDEL
LFEILHYDLFNIAPIEIAKASIAVAKENFATAANNQPKTSLRRHLHETKLVAQTDLFNKQ
PNIEMKYLINDIDELLKSAVSVTVQQFFQDVVTKMGILKYIMHQQDKGTHMQILTSFFDF
LKDESRKNPEIKLADLITTIELMKKNNIRLELNKVIFSDNGINFLTAHGSKGLEFEHVFF
IGCDKKTWDGKGRNYGFSYPDTLTNSAGDDIAQKEEARRLFYVAITRAKQCLNISFAGKD
AKGKEQEPSQFIGEILADTHLQLKFPKVNDADMFGFFATQFSEAEKPVVELLDTNYINQL
LQNYTLSVTHLSNYLDCPLRFYFQSLIRVPSGKSPSATFGQAVHWALNKAYRKLPEYGNE
FMPTEDFVKEFRWYMYRNRDSFTKTDFKLRIDYGDKILPPYYELNVPLWNKVAQTERSIK
NIEVQGVPIKGNLDKIEFNGKDVTIVDYKTGKYRNAKDKFQRPTNDEPHGGDYWRQAVFY
KILIDNDRTNDWQVVNTVFDFVEPVSEEYFKEKVVISPQDIEEVTGQITSVYQKILNHEF
NEGCGKKDCDWCHFVKSNFKQSGNILETVEGEEETD
NT seq
3171 nt
NT seq
+upstream
nt +downstream
nt
atgcaaccaaccctcaataaatataacctcaaattccgcgaagcacttgccggcttaaac
cccgaacagttggctgcggtaaataaaatggatggcccggtgctggtagtagctggcccg
ggcacgggtaaaacgcagatcctggcggcccgtatcgggaagatcctgacggataccgat
gcccagcctagcgagatcctttgtttaacttacaccgatgccggtgcagtggccatgcgc
aaacgcctgtttgaatttataggccccgatgcttaccgcatcaacatctatacctttcac
gctttttgtaatgagatcatccaggagaacctcgactatttcggcaagctgaacctggag
tcgctgtctgatctggaatcggctatgctgttccgcgaattagtggatgaatttggcaaa
gaccatttgctgaagcggtttaccggcgacatttattacgatgctccgcgcttaaaaagc
ctgttctctaccatgaaaagggagaactggacaaaagatatgattgtacaagccgtgcag
gaatacctggacgacctgcccaaccgggaggagtttgtttacaaaagagccaatgccaag
gcaggcattaaaataggagaccccaagcaaaaagatattgataaggccaaagataccatg
gccaagctattggctgccgttggcgagtacgataactacacgggtaaaatgaaagccaaa
agcttttatgattatgacgacatgatcatttgggtgctgaaggctttccgcgagaacgat
gagatcctgcgcaaataccaggagcgctatcaatatattttggtggatgagttccaggat
accagcgggtcgcagaacgaactgctcaagttcctgctcaattactgggaaacgccaaac
gtatttgtcgtgggcgatgatgaccagtctatttttaagttccagggggcaaacatgaag
aatattcttgattttgccggcgactatgtagatacgttgcacaccgtggtgctgaagcat
aattaccgctccaaccagcacattttagatatatcgggggcactcatcaacaacaatcgc
gaacgtttaaccagtcagcttaaactggataaaaacctgaaggcttcgcacccgcgcttt
gataagctggtaatagaacccaccatccaggaatacgagaaccccgcgcaggagctggtt
aatgttgccctgcagataaaacaattagtggccgatggcacccagcccggtgagatagcg
gtgatttaccgcaatcatagccaggtagaagagctgcttacttatttggaggcgcaaaaa
atagccgtaaacaccaagcggaagattgatatcctgacggtgcccttcggcgaaaagatc
gtgaacatattgcgctatctcgctatggaactggattctccttacagcggggatgagctg
ttatttgagatcctgcactatgatctgttcaatatagcacctattgaaattgcaaaggcc
agtatcgcggtagccaaagaaaattttgcaacggcagcaaataatcagcccaaaacatct
ttacgcaggcaccttcacgaaaccaagctggttgcgcaaacagatctgtttaacaagcag
cccaatatagagatgaagtacctcattaatgatatcgatgagctgcttaaatctgccgtt
agcgtaactgtacagcagttttttcaggatgtggtgaccaagatggggatccttaaatat
atcatgcatcagcaggataaaggtacccacatgcagatcctgaccagcttcttcgatttt
ttgaaagatgagagccgcaagaacccggagatcaaattagcagacctcatcactacgata
gaactgatgaaaaagaacaacatcaggctggaactgaataaggtgatcttttctgataat
ggcattaactttttaactgcgcatggctccaaggggcttgagtttgagcatgtgttcttt
attggctgcgataaaaaaacctgggatggcaaggggcggaattacggtttcagttacccg
gacaccctgaccaattcggccggtgacgatattgcccagaaggaagaagcccgcaggtta
ttttatgtagcaattacccgtgccaagcaatgcctcaatatttcttttgcaggcaaggat
gcaaaaggtaaagaacaggaaccctcgcagtttattggagagatactggcagatacacac
ctgcagctcaaattcccgaaggtaaacgatgcggatatgttcggtttttttgctacgcag
ttcagcgaggcggaaaagccggtagtagaattgctggacacgaactacatcaaccagctc
ctgcagaattataccctttcggttacgcacctcagcaactatttagattgcccgctgcgg
ttttattttcaaagtttgatccgggtgccatcaggtaaaagtccatcggctaccttcggg
caggcagtacactgggcgcttaataaggcttatcgcaaactgccggaatatggcaacgag
tttatgccgacagaagattttgtaaaggaattccgttggtatatgtaccgtaaccgcgat
tcgttcaccaaaactgactttaagctaaggatagattatggcgacaagatactgccgccc
tactatgagctgaacgtgccgctgtggaataaagttgcgcaaaccgaacgcagcataaaa
aacattgaagtgcagggggtgcccataaaaggtaacctagataaaatagaatttaatggt
aaagacgttaccatagtggattataagaccggcaagtaccgcaacgcaaaagacaagttt
caacggcccaccaacgacgagccgcatggcggtgattactggcggcaggcggtgttctat
aagatcctaatcgataacgaccgcaccaacgactggcaggtggtaaacacagtatttgat
tttgtagaaccggtaagtgaagaatattttaaagagaaagtagtgatcagtccgcaggat
atcgaagaggtaaccggccagatcacatcggtttatcaaaagatcctgaaccatgagttt
aatgaaggctgcggcaaaaaagactgcgactggtgccattttgtaaaaagcaatttcaaa
cagtctggtaatattttagaaacagtagaaggagaggaagaaacggattaa
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