Mucilaginibacter sp. PAMC 26640: A0256_04970
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Entry
A0256_04970 CDS
T04335
Name
(GenBank) integration host factor subunit beta
KO
K03530
DNA-binding protein HU-beta
Organism
mup
Mucilaginibacter sp. PAMC 26640
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mup03032
]
A0256_04970
03036 Chromosome and associated proteins [BR:
mup03036
]
A0256_04970
03400 DNA repair and recombination proteins [BR:
mup03400
]
A0256_04970
DNA replication proteins [BR:
mup03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
A0256_04970
Chromosome and associated proteins [BR:
mup03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
A0256_04970
DNA repair and recombination proteins [BR:
mup03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
A0256_04970
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
HU-CCDC81_euk_2
Hs1pro-1_C
Motif
Other DBs
NCBI-ProteinID:
AMR30821
LinkDB
All DBs
Position
complement(1166636..1166941)
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AA seq
101 aa
AA seq
DB search
MTKAEIIAEISSKTGIEKVDVQETVEAFFKVVKSSMVGGENVYVRGFGSFVVKKRAKKTA
RNISKNTAIIIPEHFVPSFKPAKTFVEKVRSGNKTTTKAAK
NT seq
306 nt
NT seq
+upstream
nt +downstream
nt
atgaccaaggcagaaattatagctgaaatctcttctaaaacaggtatcgagaaagtggat
gtgcaggaaaccgttgaagcatttttcaaagtagtgaaaagctcaatggtaggtggcgag
aatgtttatgtaagaggcttcggaagttttgttgtaaaaaagagagctaagaaaaccgca
cgtaacatttcgaaaaatactgccattattatccctgagcattttgtaccaagctttaaa
ccagctaagaccttcgtagaaaaagttcgttcgggtaacaaaactactactaaagcagcc
aaataa
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