Mucilaginibacter sp. PAMC 26640: A0256_12025
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Entry
A0256_12025 CDS
T04335
Name
(GenBank) DNA polymerase III subunit epsilon
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Pathway
mup03030
DNA replication
mup03430
Mismatch repair
mup03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
A0256_12025
03430 Mismatch repair
A0256_12025
03440 Homologous recombination
A0256_12025
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mup03032
]
A0256_12025
03400 DNA repair and recombination proteins [BR:
mup03400
]
A0256_12025
Enzymes [BR:
mup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
A0256_12025
DNA replication proteins [BR:
mup03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
A0256_12025
DNA repair and recombination proteins [BR:
mup03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
A0256_12025
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DUF7508
Rv2179c-like
GIY_YIG_2
RNase_H_2
DEDDh_C
RCC1_2
Motif
Other DBs
NCBI-ProteinID:
AMR32095
LinkDB
All DBs
Position
complement(2752624..2753991)
Genome browser
AA seq
455 aa
AA seq
DB search
MYAIVDIETTGGHASANGITEIAICIHDGKKVTRRFETLVNPQRDIPVYIRALTGITNEM
VSTAPLFEDVAHEIYHLLKGQIFVAHNVNFDYSFLRYHLNAAGYELNANKLCTVRLGRKI
MPGLLSYSLGKLCSHLGIGNNSRHRAMGDAEATAQLFSLYLKNDTVNHIGQALKQNSKEQ
RLPANLPKADIEALPNAPGVYYFHDNKGKVVYVGKAKNIKKRVCSHFSGNNPGSQRQEFL
KTIHRVSHQVCGTELIAFVLEAVEIKRLWPKYNRSLKRFENTYGLYAYEDQRGYLRLAVD
KHRKHMPAVYACNSLLEGYNLLNSLIETFSLCPKMCFIQKNDQPCTGNNLNSCACEGHET
PDDYNIKVTAAIDELKKALPTFAIRDEGRTGDEHSCILIEEGRFYGMGYISHYFDANNIQ
QLKNYLTPYPGNDYIKNIVTGYAAKFPERKVSFAV
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtacgccatagtggatatcgagacgacgggagggcatgccagcgctaatggcattaca
gagattgctatatgcattcacgatggcaaaaaggtaacgcgccgttttgaaacgctcgtg
aatccgcagcgcgatatcccggtatatatccgtgctttaaccggcatcactaacgagatg
gtgagcacagcccccttatttgaggatgtggcgcacgagatctatcacctgcttaaaggg
cagatctttgtagcacacaatgtaaacttcgattattcttttttacgttatcatttaaac
gccgccggttacgaacttaatgccaataaactttgtacagttcggctgggccgcaagatc
atgcccgggctgctatcatacagtctggggaaattgtgtagtcacttaggtataggcaac
aacagccgccaccgtgctatgggcgatgcggaagcaaccgctcaattatttagtctatat
ctaaaaaatgatactgtcaaccacattggccaggccttaaaacaaaattcaaaagaacag
cgtctgccggccaacctgccaaaggcggatatagaagctttgccaaatgcaccgggggta
tactacttccatgataacaaaggcaaagtggtatatgtaggtaaggccaagaatattaaa
aaaagggtttgcagtcatttctcgggtaacaacccaggctcgcagcggcaggagtttttg
aaaaccattcaccgcgttagtcaccaggtttgcggtaccgagttgattgcttttgtgctg
gaggcagtggagatcaaacgcttgtggcctaaatacaaccgctctttaaagcgctttgag
aatacctacggactttatgcttatgaggaccagcgtggttaccttcgcctggcggtggat
aagcaccggaaacatatgcccgcggtatatgcctgcaattcgctgctggagggctacaat
ctgctcaatagcctgatagagaccttcagcctgtgcccaaaaatgtgtttcatccaaaag
aacgaccagccctgcacaggtaataatttaaattcatgcgcctgcgagggccatgaaaca
cccgatgattacaatatcaaagtaaccgcagctatcgatgaactaaagaaagccctgcct
acttttgctatccgtgatgaaggccgcaccggcgatgagcatagctgcatcctgatagaa
gaaggccgcttttatggcatgggctatatatcccattactttgatgccaataacattcag
caattaaagaactaccttaccccctatcccggcaatgactatatcaaaaatatcgttacc
ggctatgctgcgaagttccccgagcggaaggtaagtttcgctgtgtaa
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