Mucilaginibacter sp. PAMC 26640: A0256_13770
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Entry
A0256_13770 CDS
T04335
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Pathway
mup03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
A0256_13770
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mup03019
]
A0256_13770
03016 Transfer RNA biogenesis [BR:
mup03016
]
A0256_13770
Enzymes [BR:
mup01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
A0256_13770
Messenger RNA biogenesis [BR:
mup03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
A0256_13770
Transfer RNA biogenesis [BR:
mup03016
]
Prokaryotic type
tRNA degradation factors
A0256_13770
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
KH_1
PNPase
S1_2
Motif
Other DBs
NCBI-ProteinID:
AMR32416
LinkDB
All DBs
Position
3181353..3183479
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AA seq
708 aa
AA seq
DB search
MSLKVIKKVIDLGDGRTIEIETGKLAKQADGSVVIKMGDTMLLATVVSSQEAKEGIDFLP
LSVDYQEKYASTGRIPGGFLRREARLSDYEVLISRLVDRALRPMFPEDYHADTQVMISLI
SADKDIMPDALAGLAASAALAVSDIPFNGPISEVRVAKVDGQLVINPTLSQLKTATLEFI
VAGNQHDINMVEGESAEIQEAELVEAIKFAHTAIKIQCLAQIELAEEVGKTVKRTYSHEH
SNEDLKKAIYEATYQQVYDVASSASAKDERSVKFKEVRDAYIATLGEIDDITKSLAKKYY
HDVEYDAIRNLVLDEGKRLDGRHTKQIRPIWSEVGYLPSAHGSAVFTRGETQSLTTVTLG
AKDDEQMIDGAFINGYQKFLLHYNFPGFSTGEVRPNRGAGRREIGHGNLAMRSLKRVLPH
EDENPYTIRIVSDILESNGSSSMATVCAGTLALMDAGIKISNPVSGIAMGLITNEMGTKY
AILSDILGDEDHLGDMDFKVTGTKNGIVAVQMDLKINGLSYEVLTNALDQAKEGRLHILG
EMAKTITAPREDYKPHAPRIVTIKIDKEFIGAVIGPGGKIIQEMQRETGATISIEEKDNQ
GIVQVFADNKAAIDAALTRIRNIASKPEVGEIYEGKVKSIMPFGAFVEIMPGKDGLLHIS
EIDHRRIETMDGIFNVGDEVRVKLLDVDKQGKLKLSRKVLLPKPESNK
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
atgagtttaaaagtaattaaaaaggtaattgatttaggtgacggccgcaccattgagatc
gaaaccggtaaactggctaaacaggctgatggctctgtagtaattaagatgggtgacacc
atgttattggctactgtagtatcatcgcaagaagcaaaagaaggtattgatttcttacct
ctttctgtagattatcaagagaaatacgcttccaccggtcgtatcccgggtggtttttta
cgccgtgaggctcgtttatcagactatgaggttttgatctcccgtttggttgaccgtgca
ttgcgcccaatgttccctgaagattatcatgctgatacccaagtgatgatctccctgatc
agcgctgataaagatattatgcctgatgcattagctggtttggcagcatctgcagcatta
gctgtttctgatatccctttcaacgggccgatatctgaagtacgcgttgctaaagttgat
ggccaattggttattaatccaacactttcacaattaaaaactgcaaccctcgaatttatt
gtggctggtaaccagcacgatatcaacatggtagaaggcgaaagtgccgaaatacaggaa
gctgagttggttgaagctattaaatttgcccacactgcaattaagattcagtgtttagca
caaattgaactggcggaagaagttggcaaaacggttaaacgtacttacagccacgaacac
agtaacgaagacctgaagaaagcaatttacgaagcaacttatcagcaggtttacgatgta
gcttcatctgcttctgcaaaagatgagcggtcggttaagtttaaggaagtacgtgatgct
tacatcgctactctgggcgaaattgacgatatcaccaagtcgcttgcaaaaaaatattac
cacgatgttgaatacgatgctatccgtaaccttgttttggatgaaggcaaacgtttagac
ggccgccataccaaacaaattcgccctatttggagtgaggttggttacctgccatctgcc
cacggttctgccgtatttacccgtggcgaaacccaatcattaaccactgttaccttaggt
gctaaggacgatgaacaaatgattgacggtgcgttcatcaacggttatcaaaaattcttg
ttgcactacaattttcctggtttctcaaccggtgaggttcgccctaacaggggtgcaggc
cgtcgtgagattggtcatggtaacttagcaatgcgttctttaaaacgcgtgttaccgcac
gaagatgaaaacccatacacgatacgtatcgtttctgatatccttgaatctaacggttct
tcatcaatggctacggtttgtgccggtacattggctttgatggatgcaggtattaaaatc
agcaacccggtatctggtatcgcaatgggattgatcaccaatgaaatgggtactaaatat
gctatcctttctgatatcctgggtgatgaagatcacttaggtgatatggattttaaagta
accggtaccaaaaacggtattgttgctgtgcaaatggacttaaaaataaatggcttatcc
tacgaagttttaacaaatgcgttagatcaggctaaagaaggtcgtttacatatcctcggc
gaaatggctaaaaccattaccgcaccacgtgaggactacaaaccacacgctccgcgtatt
gttaccattaaaatcgacaaagaatttattggtgcagttatcgggcccggcggcaagatc
atccaggaaatgcaacgtgaaaccggtgcgactatttctatcgaagaaaaagacaaccag
ggtattgtacaggtatttgccgataacaaggctgctatcgacgccgctttaacccgcatt
cgcaacatcgcttctaaaccggaagtgggcgaaatttacgaaggtaaagtgaaatcaata
atgccatttggtgcatttgttgaaattatgccgggcaaagatggtttgttacatatctca
gaaatagatcaccgcaggattgagaccatggacggaatcttcaatgttggtgatgaggta
cgtgttaaactgcttgacgttgataagcaaggtaaattaaaactttcccgcaaagttcta
ttgcctaagccagaatcaaataagtaa
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