Mucilaginibacter sp. PAMC 26640: A0256_16925
Help
Entry
A0256_16925 CDS
T04335
Name
(GenBank) DNA helicase
KO
K19036
ATP-dependent RNA/DNA helicase IGHMBP2 [EC:
5.6.2.5
5.6.2.3
]
Organism
mup
Mucilaginibacter sp. PAMC 26640
Brite
KEGG Orthology (KO) [BR:
mup00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mup03009
]
A0256_16925
03012 Translation factors [BR:
mup03012
]
A0256_16925
Enzymes [BR:
mup01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
A0256_16925
5.6.2.5 RNA 5'-3' helicase
A0256_16925
Ribosome biogenesis [BR:
mup03009
]
Eukaryotic type
Other ribosome biogenesis factors
A0256_16925
Translation factors [BR:
mup03012
]
Eukaryotic type
Initiation factors
Initiation associated factors
A0256_16925
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_11
AAA_12
AAA_30
Viral_helicase1
AAA_19
ResIII
SLFN-g3_helicase
AAA_22
DEAD
UvrD-helicase
Helicase_RecD
AAA_16
Herpes_ori_bp
UvrD_C_2
PIF1
PhoH
T2SSE
nSTAND3
AAA_25
ATPase
AAA_24
AAA_14
ATPase_2
AAA
NPHP3_N
AAA_5
DAP3
HEM4
Flavi_DEAD
UvrD_C
DnaB_C
NACHT
AAA_7
SYF2
RuvB_N
Motif
Other DBs
NCBI-ProteinID:
AMR32980
LinkDB
All DBs
Position
complement(3914911..3916803)
Genome browser
AA seq
630 aa
AA seq
DB search
MDYFQNLLTLLKTERDEDQQSYLKLIQNSSVTDRRSTGITWYPIAIRGSEIGKGDYLTVE
LERTTHKDIAHQFRFGAPAVLFSNHDAGTDRVDGTIAYQGGDRIKINLFTDELPDWTRNG
KLGVELLFDNNSYDEMQNALKQAALLASQPEGKLIRILTGQAEPSFVEQVTVIDTSGLNT
CQKAAAEQIVAAKDLAIVHGPPGTGKTTTLVQAIKNLITQGDQKVLVVAPSNTAVDLLSE
KLAGEGLNVLRIGNPSRVSERLTSLTLDSQMNAHVYKKDIKQLKKQAAGYKDMAHKYKRS
FGKAERDQRKALFDEAHRIIKDAGKIEQFIIDDLVAKAQVITATLVGSNHHTIRNVKFNT
VVIDEAGQALEPACWIPILKAQKVVMAGDHLQLPPTIKSDRAARNGLSTTLMEKCVALHP
AAVTLLQEQYRMNVAIMGFSSREFYGDALIANAVVANRLLFNGDLPMSFVDTAGCGFDEK
PDGTSSVNPDEAVFLLKHLQQLADQISASGTAFPSIAIISPYKSQVRMIKELFEASSLVQ
HAGQISINTVDSFQGQERDVVYISMTRSNTEGTIGFLADIRRTNVAMTRARKKLVIIGDS
ATITRLPFYADLMTYAEQIGGYQSAWEYIS
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atggactattttcaaaatttgcttaccctgctcaaaaccgaacgcgacgaagaccagcag
agttacttaaaactcattcaaaattcgtcggtaaccgacaggcgctctaccggtatcacc
tggtaccccatcgccatccggggcagtgaaatcggtaaaggtgattacttaactgttgaa
ctggaacgcactactcataaggatatcgctcatcagtttcgttttggtgcgcctgcggta
ttgttctccaaccatgatgcaggcaccgaccgtgtggatggtaccattgcctaccagggt
ggcgaccgcataaagatcaacctttttaccgatgaactgccagactggacccgcaatggt
aaactgggcgtggaactgctttttgataataacagttatgatgaaatgcaaaacgcgctt
aagcaggcagccttactagccagccagcccgagggtaaacttatccgcatcctgacgggc
caggccgaaccttcatttgttgaacaggtaaccgtcatcgatacttcgggattaaacacc
tgccaaaaggcagccgcggagcaaattgttgctgcaaaagatcttgcgatagtacacggc
ccgccgggaacagggaagactaccacgcttgtgcaagccattaagaatttaattacgcag
ggcgatcagaaggtgctggttgttgcacctagcaataccgcagtagatttgctgagcgaa
aaactggcgggcgaaggattgaacgtgctccggatcggtaatccgtcacgtgtatccgag
cgcttgacttcgctaacgctggatagccagatgaacgctcatgtgtataaaaaagacata
aagcaactaaagaagcaggccgccggctataaggatatggcccataaatacaagcgcagc
tttggcaaagcagagcgcgatcagcggaaggcattgtttgatgaggcgcaccggattata
aaagatgcgggtaagatagaacagttcatcattgatgacctggtggccaaggcgcaggtg
attaccgcaacattggttggatccaatcaccataccatccgcaatgtaaagttcaatact
gttgtgattgacgaggcaggccaggcgctggaacccgcctgctggatccccatattgaaa
gcccaaaaggtggtgatggcgggagaccacctgcaactgcccccaaccatcaaatcggat
agggctgccagaaacggcttaagcaccacactaatggagaaatgcgtggccctccatcct
gctgccgtaacccttttgcaggagcaataccggatgaatgtggccatcatggggttctcg
tcgcgggagttttatggtgatgctttaatagcaaatgcagtggttgccaaccgactactt
tttaatggcgacttgccgatgagctttgtagatacggccggatgcggatttgatgaaaaa
cctgatggaaccagctccgttaacccggatgaggcagtgttcctgctgaaacacctacag
caactggctgatcaaatatcggcatcgggaactgcatttccatctatagcaattatttct
ccctacaaaagccaggtaagaatgatcaaggaattatttgaagcctcctcattggtacag
catgccgggcaaatctccatcaatacggtggatagtttccagggacaagaacgcgatgtg
gtatacatcagcatgacccgcagcaatacggaaggcaccattggttttctggcagatatt
cggcgcacaaatgtagccatgacgcgtgcacgcaagaaactggtgatcatcggcgatagt
gccacaattacaaggctccctttctatgcagatctgatgacctacgcagaacaaattggt
ggttaccaaagcgcgtgggagtatataagttga
DBGET
integrated database retrieval system
