Muriicola soli: EQY75_07735
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Entry
EQY75_07735 CDS
T05825
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mur
Muriicola soli
Pathway
mur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQY75_07735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mur03019
]
EQY75_07735
03009 Ribosome biogenesis [BR:
mur03009
]
EQY75_07735
Enzymes [BR:
mur01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EQY75_07735
Messenger RNA biogenesis [BR:
mur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EQY75_07735
Ribosome biogenesis [BR:
mur03009
]
Prokaryotic type
rRNA helicases
EQY75_07735
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
RecG_N
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
QBA64422
UniProt:
A0A411E9P5
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All DBs
Position
1706367..1708133
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AA seq
588 aa
AA seq
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MNSFKALGLNNALLQAIEDLGFETPSEVQEKTIPILLQDESDLVALAQTGTGKTAAFGFP
LIQKIESESRTTQGLILSPTRELCLQITNEIQLYSKYVKGLNIVAIYGGASIIEQARQIK
RGAQIIVATPGRMKDMIGRGMIDISKIDYCILDEADEMLNMGFYEDIKDILSTTPKEKST
WLFSATMPKEVATIAKKFMHQPKEVTVGAKNSGVDTVQHEYYVVGGRDRYEALKRLADAN
PGIFSVVFCRTKRDTQRVAEKLIEDGYNAGALHGDLSQNQRDLVMNSFRKKQIQMLVATD
VAARGIDVDDISHVINYQLPDEIETYTHRSGRTGRAGKSGISMVIITRSELRKIKTIENI
IKQKFDPKQIPSGMEICEIQLYHLASKIRDTKINEEVDHYLPAIHDVLEGIDREELIKKI
VSVEFTRFFAYYSRVKDLNSVESSGKGKASSGSKGSDFNDNGSVRYFVNVGERDGYDWMS
LKDFLRDTLNIGKDDVFRVDVKDSFSFFNTDASLTDQILSTFKDFKVDGRFVNVEVSKSP
EGGGRKGKDKGRRKNKDKRRSDTKDRSYNKSGGRRTGKRRSKKRDGFY
NT seq
1767 nt
NT seq
+upstream
nt +downstream
nt
atgaattcatttaaagcgctggggctcaacaacgccctgctgcaagctattgaagattta
gggtttgaaaccccatccgaggtccaggaaaaaacaattccaattcttttacaggacgaa
tcagacctcgtagcccttgcccaaacaggtacagggaaaactgccgcatttggcttccct
ctcattcagaaaattgaaagcgaaagcagaaccacccagggtctgatcctttccccaaca
cgagagctttgtctacagattaccaatgagatacaactgtactcaaaatacgtgaaaggg
ctcaatattgtagcgatttacggaggtgccagtatcattgagcaagccagacagatcaaa
agaggggcacagattattgttgccactcccggaaggatgaaagatatgatcgggcgtgga
atgattgatatcagcaaaatagattattgcatcctcgatgaagccgatgagatgttgaac
atgggcttttatgaggatatcaaggacattctttccactacacctaaagagaaatcaacc
tggttgttttcggctaccatgcctaaagaggttgccaccatcgccaagaaatttatgcat
cagcctaaggaagttactgtgggggcaaaaaattcaggtgtggacaccgttcagcacgaa
tattatgtggttggcggtagagatcgttatgaggctctcaaacgtcttgctgatgcaaat
cccggtatattttccgtggtcttttgccgaacaaaacgtgacactcagagggttgcagaa
aaacttatagaagacgggtacaatgccggtgccttgcacggcgaccttagtcagaaccag
cgcgatctggtcatgaattcttttcgtaaaaaacagatccaaatgctcgtagctacggat
gtggctgccaggggtattgatgtagatgacatatcacatgttatcaactaccagcttcct
gatgaaattgaaacttacacccatagaagcgggcgaacaggaagggcaggtaaatctggg
atctctatggtgatcatcaccaggagtgagctccgtaagatcaagaccattgaaaatata
atcaagcagaaattcgaccccaaacagatcccgtccggaatggagatctgtgaaatccaa
ttgtatcatcttgcgagtaagattagggataccaaaattaacgaagaagttgaccattac
cttccggccatacatgatgttctggagggaatagatcgcgaagaattgatcaaaaagatt
gtttctgtagaattcacaaggttctttgcttattacagtcgggttaaagacctcaacagt
gtcgaaagttcaggcaagggcaaagcatcgtccggctcaaaaggatctgattttaatgac
aatggttctgtacgatacttcgtaaacgttggggaaagggacggatacgactggatgtct
ttaaaggactttttaagagacacactaaacattggcaaagatgatgttttccgggtagac
gtaaaggacagcttttccttttttaacaccgatgcctcactcactgatcagatcctcagt
acgtttaaagattttaaagtcgacggcagattcgtcaacgtagaagtttctaaaagtccg
gaaggtggcggtcgcaaaggaaaagacaaaggaaggcgcaagaataaagacaaaaggagg
agtgatactaaagatcgttcctacaataaaagtggtgggcgaagaaccggaaagcggaga
agtaaaaagagggacggcttttattag
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