Muriicola soli: EQY75_12990
Help
Entry
EQY75_12990 CDS
T05825
Symbol
rnr
Name
(GenBank) ribonuclease R
KO
K12573
ribonuclease R [EC:
3.1.13.1
]
Organism
mur
Muriicola soli
Pathway
mur03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mur00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
EQY75_12990 (rnr)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mur03019
]
EQY75_12990 (rnr)
03016 Transfer RNA biogenesis [BR:
mur03016
]
EQY75_12990 (rnr)
Enzymes [BR:
mur01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
EQY75_12990 (rnr)
Messenger RNA biogenesis [BR:
mur03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
EQY75_12990 (rnr)
Transfer RNA biogenesis [BR:
mur03016
]
Prokaryotic type
tRNA degradation factors
EQY75_12990 (rnr)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
CSD2
OB_RNB
S1
OB_Dis3
OB_HELZ2
S1CSD-TOTE-2
OB_RNR_1st
DUF7430
CoV_NSP15_N
RNase_II_C_S1
Motif
Other DBs
NCBI-ProteinID:
QBA65366
UniProt:
A0A411EC87
LinkDB
All DBs
Position
2847937..2850120
Genome browser
AA seq
727 aa
AA seq
DB search
MVKKKKRANQHRKNEITRGIFEVLEKEPNKSFNYKQIASKLDISDTEGRNILIKRLGQLK
AKERIREFERGKYKSLENKFLHEGKIEVTARGNAYVIVDGLDDDIFISNNKINRAFDGDI
VEVLVKPKRKSNKLEGEVVSIIKRKKNNFVGVLDLHKSFAFVRPTDHKMYTDIFVPINLV
GKAKNGEKVIVEVLSWEEEADSPTGKVVEVLGLPGLHDTEIHAILAEYGLPHRFPKEVDH
FANQLDTAIKEDEVSKRRDMRKVLTFTIDPKDAKDFDDALSFQQLPNGNYEVGIHIADVS
YYVTPDSILDEEAYERATSVYLVDRVVPMLPEILSNNACSLRPKEDKYTFSAIFEIDNNA
EVKSEWFGRTAIHSDERFAYEEAQFIIENKTTEIDEEVSIRGNAYSVSEDIKEAVLKLNS
LAEIMRDRRMNAGAISFDKLEVKFNLNKENEPVSVYFKEAKAANKLIEEFMLLANRKVAA
FIGKQKPKKTFVYRVHDEPNEEKLMTLNGIVSKFGHKLNFQNKKTVSASLNKLLEDVKGQ
KEQNLVDTLAIRSMSKAIYTTDNIGHYGLAFDYYSHFTSPIRRYPDVMVHRLLQHYLSGG
KSENAETVEEKCKHSSDMEYLASSAERDSIKYMQIKFMQDHKDQEFVGVISGVTEWGIYV
EIIENKCEGMVRIRDIKDDYYTFDEKQYALVGERRKKVYQLGDEVRVMVKDTDLVKRHLD
FSLLGKA
NT seq
2184 nt
NT seq
+upstream
nt +downstream
nt
atggtgaagaagaagaaaagggctaatcaacatagaaaaaatgaaattacaagaggaatt
tttgaagtcctggagaaagagcccaataaaagttttaattacaagcaaattgcatcaaaa
ttagatataagcgatactgagggaagaaatatcctgattaagagattaggccagctaaaa
gctaaagaaagaataagagaatttgaaagagggaaatacaaatccctggaaaataaattc
ttacacgaaggtaaaattgaggttacagcaaggggtaatgcttatgttattgtagacggc
ttagacgatgatatatttatttctaacaacaaaataaatagagcatttgacggtgatatc
gttgaggtactggtaaagccaaaacgaaaatcgaataagctggaaggtgaggtcgtatct
atcatcaaaaggaagaagaacaattttgtaggagtactggatttacataagtcttttgcc
tttgtaagaccgacggatcacaaaatgtacacagacatttttgttcctattaaccttgta
ggaaaggcaaaaaatggagaaaaggtgatcgtagaagttctctcatgggaagaagaggca
gattcgcctacaggtaaagttgtagaagtactcggtttacccggactacacgatacggag
atccatgctatcctggccgaatatggactcccccatcgttttcccaaggaagtggatcat
ttcgctaatcaactcgacacggctataaaagaagatgaggtttccaaaagaagggatatg
agaaaggttttaacctttactattgatcccaaggatgccaaggattttgatgatgcctta
tcttttcagcaactccccaacgggaattatgaagttggaattcatatagctgatgtatct
tactacgtaactccggatagtattctcgatgaagaggcctatgaaagggcgacttccgta
tatctcgtagacagggtagtacctatgttaccggaaatactttctaataatgcttgttcc
ctcaggccaaaagaagataaatacacgttttctgctattttcgaaatagataataatgcc
gaggttaaaagcgaatggtttgggagaacagcaatacattctgatgaacgctttgcctat
gaagaagctcagttcattatagaaaataaaactaccgagatagatgaagaagtttcgatt
cgaggaaacgcttattcggtatctgaagatattaaagaagccgttctaaaactcaattct
ctcgcggagatcatgcgggacaggcgaatgaacgcgggtgcaatctcatttgataaactg
gaggtgaagtttaatctgaataaggaaaatgaacctgtaagtgtgtattttaaggaggca
aaagcagcaaataagcttattgaagaatttatgcttttagccaaccgcaaagtcgcagca
tttattgggaaacaaaaacctaaaaagacatttgtttacagagttcacgacgaacccaac
gaagaaaaattaatgactttaaacgggatcgtgtccaaatttggacacaagcttaatttt
caaaataaaaagaccgttagcgcttctcttaataaactccttgaggacgtaaaagggcag
aaggaacagaacctggttgataccctggctatcaggagtatgagtaaggccatctacacc
accgataatattggtcattacggcctggcctttgattattacagtcattttacctcccca
atacgtcggtacccggatgtgatggtccatcggttgttacagcactacctcagtggaggg
aaatcggaaaatgccgaaaccgtcgaagaaaagtgtaagcactcttcagatatggaatac
ctggcgtctagtgcagagagggattctatcaagtatatgcagatcaaatttatgcaggat
cacaaagaccaggagtttgtaggagttatttccggtgtcacagaatgggggatctatgtg
gagatcattgagaacaaatgtgagggaatggtcaggattagggatatcaaagacgattat
tatacctttgatgaaaagcaatacgctctggtgggcgaacgcaggaaaaaggtataccaa
ttaggcgatgaggtccgggtaatggttaaggatacagatcttgtaaaaaggcacctcgat
tttagtcttctgggtaaagcttaa
DBGET
integrated database retrieval system
