Musa acuminata (dessert banana): 103969449
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Entry
103969449 CDS
T03447
Name
(RefSeq) nuclear pore complex protein NUP98A
KO
K14297
nuclear pore complex protein Nup98-Nup96
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
103969449
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103969449
03036 Chromosome and associated proteins [BR:
mus03036
]
103969449
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Nuclear pore complex
103969449
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
103969449
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Nucleoporin2
Nup98_GLEBS
Motif
Other DBs
NCBI-GeneID:
103969449
NCBI-ProteinID:
XP_009381259
UniProt:
A0A804HYY4
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All DBs
Position
BXJ2-2:20535767..20548533
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AA seq
1028 aa
AA seq
DB search
MFGPTNPFGQSSSSSFGSQSVFGQTSSSGNNPFAPKPFGSSNPFGSQTGGSVFGSTSTGV
FGQPSTPAFGASSAPAFGSSMPAFGASSTPAFGGSSSSFGGSSLFGQKPAFGNFGSSPSQ
SSPFGSTFQQTQPAFGNSLFGSTSPFGASSQPAFGATTTPTFGSASTPSFGATTTPTFGA
TSTPAFGSTATPAFGSTSTSPFGTTGGSFGVSSSPAFGSTVTPSFGAPTAPTFGSSSTPA
FGASTAPTFGSPTVSGFGASSTPSFGFGSTPSFGQSASAFGSTPFGASPSPFGAQSSPFG
AQATTPTFGSPGFGQSTFGGQPGGTRAAAFSPTPEVDGGTGSQPAGKMESISAMPAYKDR
SHEELRWEDYQRGDKGGPNPSGQPAGAINFSASSQTSPFGSAGTFGQSSTNPFSSTTPSN
PFALKPPSFGSSGFGSTSSSIFSSPFTTSSSSPFGSTSSTSPMFGAPTGSTFGSSLSSMA
FGGTTSSSAFGSTPSIFGSSMAGPTSTFGTGLGFGNTQSSGLFQSSAAPFGQASSLFGQP
NTGFQQAMPTFVSNQFASQSTGFGGSLFSSSTPSVFPSSTPVGFGQTAPSVQTPFQLAPV
AQTSSTFSFPNVGQAQPASSGGFGSISNIFSQGTFTQNAASQSNMVMQPAPVTNPFGTLP
AMPQMSIGRTGSAPSIQYGISSMPVADKPTLLRASSMLVPRHLSQRRIKLPPRKYSAKND
GPRVAFFADDETQSTPKADAYFVPRENPRALIIRPIEQWPPRSNMEKENIMKNGSIPAAE
NGKVSGEPSAPAFKEMYAGDNDEYATGNGHTREHTGTTVSASKSLQKENGNGDDQMQKVT
DSSYVKISGHRAGKAAIVYEHGADIEALMPKLRQDDYYTEPRIQELAAKERAEPGFCRHV
KDFVVGRHGYGSIKFYGETDVRGLDLESIVQFNHREVIVYSDDSKKPPIGQGLNKPAEVT
LLNIKCMNKKTGQQYTEGPNVDKYKEMLTLKGEEQGAEFLSFDPVKGEWKFKVKHFSSYE
FLLETDCS
NT seq
3087 nt
NT seq
+upstream
nt +downstream
nt
atgttcggccccaccaatcctttcggtcagtcttcaagtagttcttttggttcccagtca
gtgtttgggcaaacaagctctagtggcaataatccatttgccccaaaaccatttggaagt
tcaaatccttttggttctcagacagggggttcggtctttggcagcacatctactggtgtc
tttgggcagccttctacacctgcctttggtgcttcatcagctccagcttttgggagttcc
atgcctgcctttggggcatcatcaactcctgcttttggcggctcttcctcttccttcggt
ggttcttccttgtttggtcagaagccggcctttggaaactttggttcatctcctagccaa
tcaagtccttttggtagtacatttcagcaaacacagccagcatttggtaacagccttttt
ggttccacatcaccatttggtgcatccagtcaacctgcatttggtgccactacgaccccc
acttttggatctgctagcaccccttcttttggtgctacaactaccccaacttttggtgcc
acaagcacacccgcatttggttctactgcaaccccagcatttgggtcaacatcgacatca
ccgtttggtactacgggaggttcctttggggtctcaagttctccagcatttggttcaaca
gtgacaccatcttttggggctccgactgcccctacatttgggtcctcaagcactcctgca
tttggggcatctactgctcccacatttggctctccaacagtttctggttttggtgcatca
agtactccttcatttggttttggctccaccccttcctttggacagtcagcatctgcattt
ggtagcacaccttttggagcatcaccatctccttttggtgctcagagttccccatttggt
gctcaagcaacaacaccaacatttggtagcccgggatttggacaatcaacttttgggggt
caacctggagggacaagagcagcagcatttagcccaacgcctgaggttgatggtggcact
ggtagtcagcctgctggcaagatggagtcaatatctgccatgcctgcatataaagatagg
agtcatgaggaactaagatgggaggattatcaacgtggtgataaaggtggtccaaatcct
tcggggcagcctgcaggtgctatcaatttttcggcttcatctcaaaccagcccctttggt
tctgcaggcacatttggtcaatcttccacaaaccctttctcctccaccacgccttcaaat
ccttttgcacttaaacctcccagttttggttcatctggatttggttctacctctagttca
attttcagctcaccattcaccacatcctcatcgagcccctttggttcaacttcctctacc
agtccaatgtttggtgctcctactggttcgacatttggttcaagtttgtcatccatggct
tttggtgggacaacatcatcatctgctttcggttctacgccttcaatatttggttcttca
atggcggggccaacttcaacttttgggactggtttgggctttggcaacactcaatcttct
gggttattccagtcctctgctgcaccctttgggcaggcgtcatccttgtttgggcagcca
aatactggatttcaacaagctatgcctactttcgtatcaaatcaatttgccagtcagtcc
actggttttgggggaagtctgttcagtagttcaacgccatcagtctttccttcaagcact
ccagtcggatttgggcaaacagctccttcagtgcagacaccctttcaactggcaccagta
gcccagacatcaagtacattttcttttccaaatgtaggccaggcacaaccagcctcttct
ggtggctttggtagcatttcaaacatcttcagtcaaggcaccttcacacagaatgctgct
agtcaatccaatatggtcatgcaaccagctcctgtgacaaatccttttggaacacttcca
gcaatgcctcagatgtcaattggtcggacgggctctgccccttcaattcagtatggaatt
tctagcatgcctgttgctgacaagcctactttattaagggcttcctcaatgctagttcca
agacatttatctcagagaaggatcaaactacctccaaggaaatattccgcaaaaaatgat
ggcccaagggtggctttttttgctgatgatgaaacacaatcaacaccaaaggcagatgca
tattttgtccccagagaaaatcctagggcactgatcattcgtccaattgagcaatggcct
ccacgaagtaatatggaaaaggaaaatatcatgaaaaatggatcgatcccagctgccgaa
aatggtaaagtatcaggagagccatctgctccggctttcaaggagatgtatgcaggtgat
aatgatgagtatgctactgggaatggccatacaagggagcatactggcacgaccgtctca
gcctccaagtctttgcagaaggaaaacggtaatggtgatgatcagatgcagaaggtaacc
gattcttcttatgtgaaaatatcgggacacagggctggcaaggctgcaatcgtgtacgag
catggtgcagacatcgaggcgctaatgccgaagctccgccaagatgattactataccgaa
ccacgtatccaggaactcgctgcaaaagagcgcgctgagccaggcttctgccgccatgtc
aaggattttgtggttggtaggcatggctatggcagcatcaagttttacggagaaactgat
gtgagggggcttgacctagagtcgatcgtccagttcaaccaccgcgaagtgattgtttac
agcgatgatagcaagaagcccccaattgggcagggtctcaacaagcctgccgaggttaca
cttctcaacatcaagtgtatgaacaagaagacagggcagcagtacacagaggggcccaac
gtcgataagtacaaggagatgctgacactgaaaggtgaggagcagggggctgagttcctg
tcctttgatcccgtcaagggagagtggaagttcaaggtcaagcacttcagctcttatgag
ttcttgctagagacggattgttcgtaa
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integrated database retrieval system
