Musa acuminata (dessert banana): 103970170
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Entry
103970170 CDS
T03447
Name
(RefSeq) probable RNA helicase SDE3
KO
K18422
helicase MOV-10 [EC:
5.6.2.5
]
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103970170
03036 Chromosome and associated proteins [BR:
mus03036
]
103970170
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.5 RNA 5'-3' helicase
103970170
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103970170
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Other miRNA pathway proteins
103970170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MOV-10_beta-barrel
AAA_11
Motif
Other DBs
NCBI-GeneID:
103970170
NCBI-ProteinID:
XP_018676572
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All DBs
Position
BXJ2-11:complement(1337639..1340774)
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AA seq
770 aa
AA seq
DB search
MGNLLDLLRRIFFGGEENEGFDRSNATSTSSTHGGYYHRADDSPTRSPALTSTRRTAQAS
SFPSSLTADSFHFVKPQLPVQPRQPSLGASPSFSQPLPFEVQAARPLPPKPSPTVTDAAD
PVKRQQLSPPPPAAPSQSRSAVATAKHQPPSNPSEPSCRASPSSPSSSKAATASPLLSKP
PSAFATSTQSPSTTVTSATRYVDKRQLPSKPSEPSSKAAASSSLSSMVSATSAPRSKSPY
EPVLTVLVDTTSQFTSKNPRESRPNTSSPSSNDSASSSPLSSKASPASPIPSKSYPFSLS
SQPPESDGRSPGTPGSNLKRTTPRYDIPEHLQVMIKRDIVPPVLKMPLSPQNYAEYFATL
LYAEDYEQEKWSDYLLSEVTLDLRPKTEFRTRNAGQTGKSSKKQNDVYPFVAFEIDAVPE
RRPYLLSRDYVILKPSGNTDAAPFKGVIVRVVKSTTVLAEFEHDFHKQHSPAKKYDVNFS
FNRVCLKRSHVAVSAAADPILCKILFPDPTPPTNSSCSPIFQASLNIRDSKIRTLRRIQN
LEGLVPYLIDGPLIDHRPLSDMEAESNLSITGARSNLSITGHIIREAIVRIYRASSDCRI
LVCSPRNKTCDALMQSLFDEIPETKLFRAYAAFRDWELVPEDIMPTCMYEGECFVCPPPD
ELQQFAVVASTFMSSFRLHSAGIRADHFTHIFLVDASSAMEPEATVALASLVSEKTVIVI
TGSLNDGPKWVRSGMARRKTGLKRSLFHRLREREPYRNIDPTYISILSPN
NT seq
2313 nt
NT seq
+upstream
nt +downstream
nt
atgggtaatcttcttgatcttttgcgacgcattttcttcggcggagaagagaacgagggt
ttcgatcgatcgaatgcaacaagtacaagtagcactcatggcggatactatcatcgggcg
gacgactcgccaacacgatctccggcgctgacgtcaactaggaggacggcgcaagcctcg
tcgtttccttcatcacttaccgctgactcattccacttcgtcaagccccagcttccggtg
cagccccgtcaaccttcgcttggagcttctccatctttctcgcaacctctgccgttcgag
gttcaggcagctcgccctcttccgcccaagccgtcacccactgtcaccgacgccgccgat
cccgttaagcgccagcagctgtcacctcctccacctgccgccccgtcgcagtcgcgttcc
gccgtcgccactgccaagcatcagcccccgtctaatccctccgaaccatcatgtcgggct
tctccatcttccccttcgtcgtccaaggcagctacggcaagtcctcttctatcgaaaccg
ccttctgcatttgctacctcgacgcagtcgccttccaccacggtcaccagtgccacgcgc
tatgtcgacaagcgtcagctgccgtcgaaaccctctgaaccctcgtcaaaagctgctgca
tcttcgtctctgtcatccatggtctctgcaaccagcgctcctcgatcaaagtcgccttac
gaacctgtcctcaccgtcctagtcgataccactagccaattcacatccaagaatccccgc
gaatctcggccaaacacttcttctccttcgtccaacgattctgcatcttcttctcctttg
tcatccaaggcgtctccagcttctccaatcccgtcaaaatcttatccatttagcctctca
tcacagccacctgaatctgacggaagatcgccgggaacacctggatccaacctaaagcgc
acgactccaagatacgacattccggagcatctgcaggtgatgatcaagagagacatagtg
ccgccagttctgaagatgccattgtctccgcagaattatgccgaatactttgcaaccttg
ctttatgcagaggactacgagcaagagaaatggagcgattatttactgtcggaagttact
ctggacttgcggccaaagaccgagtttagaactcggaacgccggacaaaccgggaagagc
agtaagaaacagaacgatgtctatccctttgtagctttcgagatcgacgcagttcctgag
agacggccttatcttttatcaagagattatgtcattctgaaaccttcaggcaacacggac
gctgcaccctttaagggagtcatcgtacgcgtggtaaagagtacaacggtactggcagaa
ttcgaacatgatttccataaacagcattcgccggcgaagaagtacgacgtgaacttctcc
ttcaacagagtttgcttgaaaaggtctcatgtggccgtctcagctgcggcagatcctata
ctgtgcaaaatcctcttccccgatccaacaccgccgaccaattcctcgtgctcacccata
ttccaggcttcactaaacatcagagattccaagattcgcacgttgagaaggattcaaaac
cttgaaggccttgtaccttatctcatcgacggaccgcttatagatcatcgacctctcagt
gacatggaggccgaatcgaatctgagcatcacgggagctcgatcaaatctttctatcacg
gggcacatcattcgggaagccatcgtccggatttacagggcctcctccgactgcagaata
cttgtgtgctctcccaggaacaagacgtgcgatgcactcatgcaaagtttgttcgacgaa
atcccagagacgaagttgttccgagcttatgcagcctttcgagactgggagcttgtgccc
gaggacattatgccgacatgcatgtacgaaggggagtgcttcgtttgcccacctcccgat
gagctgcagcagttcgccgtggtggcgtctacgttcatgagcagcttcaggcttcacagc
gccggaatcagagccgaccacttcactcacattttcctggtggatgcttcgtccgccatg
gagcccgaagcgacggttgctctcgcaagcctggttagcgagaagacggtcatcgtaatc
acaggttcgttgaacgacgggccaaaatgggtgagatcaggaatggcacggaggaagact
ggactgaagagatctctgttccataggcttcgggagcgagagccctaccgcaacatcgat
cctacgtatattagcatcctcagcccaaactag
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