Musa acuminata (dessert banana): 103970534
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Entry
103970534 CDS
T03447
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic isoform X1
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103970534
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103970534
03110 Chaperones and folding catalysts [BR:
mus03110
]
103970534
03029 Mitochondrial biogenesis [BR:
mus03029
]
103970534
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
103970534
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103970534
Messenger RNA biogenesis [BR:
mus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103970534
Chaperones and folding catalysts [BR:
mus03110
]
Heat shock proteins
HSP60 / Chaperonin
103970534
Mitochondrial biogenesis [BR:
mus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103970534
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103970534
Exosomal proteins of other body fluids (saliva and urine)
103970534
Exosomal proteins of breast cancer cells
103970534
Exosomal proteins of colorectal cancer cells
103970534
Exosomal proteins of bladder cancer cells
103970534
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103970534
NCBI-ProteinID:
XP_009382612
UniProt:
A0A804L4Q4
LinkDB
All DBs
Position
BXJ2-11:complement(4973016..4978627)
Genome browser
AA seq
609 aa
AA seq
DB search
MASTFSTMSTIGSLGAATCLHADKASAEKFSKFSSLASISSGSSSSRRQNLLMQKRCNSR
IRAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPRIVNDGVTV
AKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANPVQI
TRGIEKTTKALVAELKLMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMSKVGRKGVVTL
EEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMSVEYENCKLLLVDKKITNARDLINVL
EDAIRGGYPVVIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGERKSQYLDDIAILTG
ATVIRDEVGLSLDKAGKEVLGTAAKVVLTKETTTIVGDGSTQEEVTKRVAQIHNLIEASE
QEYEKEKLNERVAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVGGGC
TLLRLASKVDAIKETLENDEQKVGADIVRRALSYPLKLIAKNAGVNGSVVVEKVLSNGDF
KYGYNAATGNYEDLMAAGIIDPTKVVRCCLEHAASVSKTFLTSDAVVVDIKEPEPVPAGN
PMDNSGYGY
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
atggcttctacttttagcaccatgtccacaatcggctctttgggtgctgctacttgtctc
catgccgacaaggcctctgctgaaaagttctccaagttctcttcacttgcttccatatct
tctggttcatcgagcagcagaaggcagaacttgctaatgcagaagaggtgcaattctagg
atcagagctatggccaaagagttgtattttaacaaggatggctctgccattaagaagcta
cagactggggtcaataaacttgcagaccttgttggagttacacttggtccaaagggcaga
aatgttgttttggagagcaaatatggatcaccaagaatcgttaatgatggtgttaccgtt
gccaaagaggttgagttagaagatccagttgagaatattggagctaagttagtaaggcaa
gctgctgcaaagacaaatgaccttgctggtgatgggactaccacctctgttgttcttgct
caaggtttaattgctgaaggtgttaaggtggttgcagcgggtgccaacccagttcagatt
actagaggtattgaaaaaacaacgaaagccctagtggctgaactgaagctaatgtcaaaa
gaggtagaagacagtgagctagctgatgtagctgctgtaagtgctggaaacaattatgaa
attggtaatatgatcgcagaggctatgagtaaggtgggtaggaagggagttgtgacacta
gaagaagggaagagtgctgagaataatttgtatgtcgttgaaggaatgcaattcgatcgt
ggctacatctccccatattttgtaacagatagtgagaaaatgtcggttgaatatgaaaat
tgcaagttgcttcttgtggacaagaagattacaaatgcaagggatctcatcaatgtctta
gaagatgccataagagggggatatcctgttgtaataattgctgaagacattgaacaggaa
gctcttgcaacccttgttgtgaacaaactcagaggttcattgaagattgctgcactcaag
gctccaggtttcggagagcggaagagtcaatacctggatgacattgccatacttactgga
gccactgtaatcagagacgaggtgggtctttccttggacaaggctggaaaagaggtatta
ggtactgctgctaaagttgtgctaacaaaggagaccacaactatcgttggtgatggtagc
acacaggaagaagtaactaaacgggttgcacagatacataatctaattgaggcttctgag
caggaatatgaaaaggagaagctaaatgagagggttgccaaactttctggtggtgttgct
gtcattcaggttggggcacagacagagactgaattgaaggagaagaaactaagagttgaa
gatgctttgaatgctacaaaggctgctgtcgaggaaggtatagttgttggaggtggctgc
acacttttgagactggcatcgaaggttgatgccatcaaggagactcttgaaaatgatgag
caaaaggtcggagcagatatagtaaggagggcacttagttatccattgaaattgattgca
aaaaatgctggagtgaatgggagtgttgtcgtcgagaaggtgctttcaaatggtgacttt
aaatatggttacaatgctgcaactggaaattatgaagatctaatggctgctggaattatt
gaccctacgaaggttgtcaggtgctgcttggagcatgctgcatcagtttcgaaaacgttc
ctcacctccgacgctgtcgtggttgacatcaaggaacctgagcctgtgcctgctgggaac
ccaatggacaactcaggatatggctattaa
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