Musa acuminata (dessert banana): 103970624
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Entry
103970624 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC103970624 isoform X2
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03440
Homologous recombination
mus03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
103970624
03460 Fanconi anemia pathway
103970624
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103970624
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
103970624
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
103970624
FA (Fanconi anemia) pathway
Downstream FA components
103970624
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
HBB
Motif
Other DBs
NCBI-GeneID:
103970624
NCBI-ProteinID:
XP_009382746
UniProt:
A0A804L552
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Position
BXJ2-11:complement(5879982..5892823)
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AA seq
1290 aa
AA seq
DB search
MNPSTPLRSPNPSKHGGPGVYQIGGVPVEFPFKPYGSQLAFMGRVISTLDRARRQGRCHA
LLESPTGTGKSLSLLCSSLAWQRHHQHLVLSGAAAPPPCPPPLASDPLVHGGGFIPPSQP
SSDAEEPPAPTSARAQRRQSLPKIYYASRTHSQISQVVREYRKTSYRVPMAILASRKHYC
TNKHVCTRDNLDDECKLLLKDENLGCSEYKNAHKVKCHPSLQKGGCYEVHDIEDLVKVGH
SVKGCSYFAAQTMAEEAQLVFCPYSYIINPTVRRAMDIDIKGSIVILDEAHNIEDVARDA
GSIEVEEDVLFALQTELEHLCMADGGAMTYQPLYDMIQGIISWIGDRKMSMKKHEFEHYS
SFWTADKAIRELQQAGITEQCFPILHQCATKAIKAASDEESVGNRLSGMSLIALEGLFSS
LSYFFCGNGSRATDYQLALQRYVKREGGNAANGWICKLSLWCLNPAVVFKEIANLSLSVI
LTSGTLAPMGSFASELGVQFEACLEAPHVIDVESQVWAAVVPAGPANCQLNASYKTADGY
AFQDGLGASLEEICKIAPGGVLVFFPSYKLLEKLHFRWSQTGQWSRLNAEKLLFVEPRGA
MDEFEPVLKGYYEAIRGNTGAPHVKKRLGLMRASKNPSSKECSQNPAKGAAFLAVCRGKV
SEGIDFSDENARVVVIVGIPFPNKNDIHVVLKKKYNDTYRSSKHLLSGSEWYCHQAFRAL
NQAAGRCIRHRFDYGAIIFLDERFTEERNLTYISKWLKSSIKHFNSFDESLMGLRSFFET
AQKQFGQKGDHPTSKNVSQTESYNSDFSEENSLSSKSSLNQGIQKEKVKKVKVNHQSARK
TIHESRAAPAKNNKLIKSSSLDGESAPLSSLKDYFIKGGKATSETNIKPSIFHGDYVDPN
ESTRKQSKCLETISAGLCETKLHQPLVSESFNADDNNATCESVSKVESLYPAVATFDQFR
ERATLSPSTFSNGTISEDTLASAGSPESNKCMDPFNLEKEIFLNMSVSSHSEKRRKLTDL
QMTGLNQMDCISSDTESFYPVDSVSSISRETDQISETPFSDNCSASQHQIPSQGMFIQNG
GTSVEKKLVLSCLYCNSPLGLQKNDFLVRCSLTSSSKAFLAYVLKHGPPTEGRLNSLRST
PETDVPVVACDSSAVDHHIFDKGIKEVASQHDFWSEEDGCVFRILNCPFCTARKRCLGVR
IIAADASNSHLLNKVLFFAYYLDMKDEQKPTTKVSMPISCNAPGQGSALTEIERDSYVSC
PQKTELLNARRSKLSLPKKDQCSLEHRAGV
NT seq
3873 nt
NT seq
+upstream
nt +downstream
nt
atgaatccctcgacgccacttcgaagccctaaccctagcaagcacggcggccccggcgtc
taccagatcggcggcgtccccgtggagttccccttcaagccctacggctcccagctcgcc
ttcatggggcgcgtcatctccaccctcgatcgcgcccgccggcagggccgatgccacgct
ctcctcgagtcccccaccggcaccggcaagtccctctccctcctctgctcctccctcgcc
tggcagcgccaccaccagcacctcgtcctatctggggccgctgctccgcccccgtgtccc
ccgccgctcgcgtccgatcccctcgtccatggtggcggatttattcccccgtcccagcct
tcgagtgacgctgaggaacctccggcgcctacaagcgctagagctcagaggagacagtcg
cttcccaaaatctactatgcttcgaggactcactcccagataagtcaggtggttcgtgaa
tataggaaaacatcctatcgggtgccaatggcaattctggcatcacgaaagcactactgc
actaacaagcatgtgtgcacaagagataatctggatgatgaatgtaaattgcttctgaag
gatgaaaacctaggttgcagtgaatacaaaaatgcacacaaagtcaaatgtcatccctct
cttcagaaaggtggctgttatgaggttcatgacattgaagatcttgtaaaagttgggcac
agtgtgaaaggttgttcatattttgctgcacaaacaatggctgaggaagctcagctagtt
ttctgcccatacagttacattataaatccaacagtccggagagcaatggatatagatata
aaaggatccattgtgatactggatgaggcccacaacatagaggatgttgcacgtgatgca
gggagtatagaagttgaagaggatgtgctttttgcattgcaaacggaacttgaacactta
tgcatggctgatggtggagcaatgacataccaaccattatatgacatgattcagggaata
ataagttggataggtgacaggaaaatgagcatgaaaaagcatgaatttgagcactactct
tcattttggactgctgataaggccattagggagctccaacaggctggaattacagaacaa
tgttttccaattctacatcaatgtgccacgaaggcaattaaagctgcttcagatgaagaa
tctgttggaaaccgtttaagtggcatgtccttaattgcattggaaggtctattctcctca
cttagttatttcttctgtggaaatggcagccgtgcaactgattatcaactagcattgcaa
cgttatgttaaaagagaaggcggtaatgctgcgaatggctggatctgcaaattgagtttg
tggtgcctgaatcctgctgttgttttcaaagagattgcaaatctgtctctttcagttatc
cttacatcaggaactcttgccccgatgggctcatttgcatctgaacttggagtgcagttt
gaagcttgcttggaagcaccacatgtcattgatgtggaatcacaagtttgggctgcagta
gtccctgcaggtcctgcaaattgccagttaaatgccagctacaaaactgctgatggatat
gctttccaggatggacttggagcttctctagaggaaatatgcaagattgcaccaggtggt
gttcttgttttctttcctagttataagttgttggaaaagctacattttcgatggagtcag
acaggtcaatggtctcgattgaatgctgaaaagctcctttttgttgaaccaagaggagct
atggatgaatttgaacctgttcttaaaggctattatgaagcaattcgtgggaatacaggg
gctcctcatgtgaaaaaaagacttggtctaatgagagcctccaaaaatccttccagcaag
gagtgctcacaaaatcctgcaaaaggagcagcttttcttgcagtttgccgaggcaaggta
tcagaaggtattgacttctcagatgaaaatgctagggtagttgtgattgttggtattcca
tttccaaacaaaaatgacattcatgtggtgttaaagaagaagtataatgatacatataga
tcatcaaagcatctccttagtgggagcgaatggtattgccaccaagcattccgtgctctg
aatcaagctgcaggtcgctgcattcgccacagatttgattatggagctattattttttta
gatgagcggttcacggaggaacgaaatctcacgtacatctcaaagtggctgaagagttca
atcaagcatttcaacagctttgatgaatctctcatggggttacgaagcttttttgaaact
gctcagaagcagtttggtcaaaaaggtgaccatccaactagcaagaatgtttctcagact
gaatcatacaattctgattttagcgaggaaaactcattatcctcaaaatcaagtctgaac
caggggattcaaaaggaaaaagttaagaaagtcaaggtcaaccatcagagtgcaaggaag
actatccatgagagtagagcagctcctgcaaaaaataacaaattaatcaaatcttcaagc
cttgatggggaaagtgcccctctctcttcattgaaggattactttatcaagggaggcaag
gcaactagtgagacaaatatcaaaccctcaatcttccatggagactatgtggaccctaac
gaaagtacccggaagcaatccaaatgtttggagaccatatcggcaggattgtgtgaaacc
aagttgcatcagcctctagtcagtgaaagcttcaatgcagatgataataatgctacttgc
gaaagtgtgtccaaggttgaaagcctgtatcctgctgtagccaccttcgaccagtttcga
gagagagccactctttcaccctcaacattttcaaatggaaccatatctgaagatacattg
gcatcagcaggttctcctgaaagtaacaagtgcatggatcccttcaatcttgagaaagaa
atattcttgaacatgagtgtgagttcccacagtgaaaaaagaagaaagctaacagatttg
caaatgactggtcttaatcagatggactgtattagttctgatacagaatccttctaccca
gttgactctgtcagcagcatatcaagagaaactgatcaaatatctgaaacaccattttca
gacaactgttcagcatcccagcaccagataccaagtcaaggaatgttcatacaaaatggt
ggtacatctgtagaaaagaagctagtattaagttgtttgtactgtaatagtccattggga
ttgcagaagaatgatttcctagttaggtgttcattgacttcatcatcaaaggctttcttg
gcatatgtgctgaagcatggacctccaactgaaggtcgtttaaattctcttcgcagtaca
ccagagacagacgtgcccgttgtagcttgtgattcctccgctgttgaccatcacatcttt
gataagggcatcaaagaggttgcttcacaacatgatttctggtctgaagaagacggttgt
gtattcaggatacttaactgccccttctgtactgcacgaaagcggtgcctgggcgtgcga
attattgcagctgatgcatctaatagtcacttactgaacaaggttctcttttttgcatat
tatttggatatgaaagatgaacaaaaaccaacgacaaaggtttccatgcccattagttgc
aatgctccaggacaaggatcagccctaactgagattgagagagattcatatgtttcttgt
ccacagaagactgagctcttaaatgctagaagatcgaagctcagtctacccaaaaaagat
caatgttctttggagcatcgagctggagtctag
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integrated database retrieval system
