Musa acuminata (dessert banana): 103971314
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Entry
103971314 CDS
T03447
Name
(RefSeq) transcription elongation factor SPT4 homolog 2
KO
K15171
transcription elongation factor SPT4
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03250
Viral life cycle - HIV-1
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
103971314
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mus03021
]
103971314
03019 Messenger RNA biogenesis [BR:
mus03019
]
103971314
Transcription machinery [BR:
mus03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
103971314
RNA polymerase I system
103971314
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
103971314
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt4
Motif
Other DBs
NCBI-GeneID:
103971314
NCBI-ProteinID:
XP_009383580
UniProt:
A0A804L6R5
LinkDB
All DBs
Position
BXJ2-11:20296571..20301752
Genome browser
AA seq
133 aa
AA seq
DB search
MASGKRSDYFRGDEEDDRAPSFAQIPTSFGHELRACLRCRLVKTYDQFRESGCENCPFLE
MEKEHDNVVNCTTPNFTGIISVMDPSRSWAARWLRIGRYIPGCYTLAVSEELPEEYQAIC
ADNNVQYVPPKRA
NT seq
402 nt
NT seq
+upstream
nt +downstream
nt
atggcgagcgggaagcggagcgattacttccgtggggatgaggaggacgatcgggcgcca
agcttcgcccagatccccaccagcttcggccacgagcttagggcttgcctccgctgtcgt
ctcgtcaagacctacgaccagttcagggaatctggatgtgagaactgccccttcttggag
atggagaaggagcatgacaatgtcgtaaattgcaccacccccaattttacagggataatt
tcagtcatggatccaagtagaagttgggctgctagatggttgagaattgggaggtatatc
cccggatgctatacactggcagtctctgaagaacttccagaggagtatcaggcaatttgt
gccgataacaatgttcagtatgtgcctcctaagcgtgcataa
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