Musa acuminata (dessert banana): 103973007
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Entry
103973007 CDS
T03447
Name
(RefSeq) protein CCA1 isoform X1
KO
K12133
MYB-related transcription factor LHY
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04712
Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09150 Organismal Systems
09159 Environmental adaptation
04712 Circadian rhythm - plant
103973007
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
mus03000
]
103973007
Transcription factors [BR:
mus03000
]
Eukaryotic type
Helix-turn-helix
Tryptophan clusters Myb, Myb-factors
103973007
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Myb_DNA-binding
Myb_DNA-bind_7
Myb_DNA-bind_6
Motif
Other DBs
NCBI-GeneID:
103973007
NCBI-ProteinID:
XP_009385733
UniProt:
A0A804IQH7
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Position
BXJ2-4:15714561..15720040
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AA seq
726 aa
AA seq
DB search
MRYFLDQVERLVGYMEGGWMIHVADFKSKCPRLLSTPPFSASEVSDLEMEEKSCGENMVA
KVRKPYTITKQREKWTEEEHNRFLEALKLYGRSWQRIEEHIGTKTAVQIRSHAQKFFTKL
EKEALMKGVSPGQVHDIDIPPPRPKRKPSNPYPRKMSTGVPSPSPSAEATDDKPPTPSSL
QPTNQHSFRLESDAATERLAAMETVAAKENFEDGNRSEVIDINQDVPSASFFTEFIPTSE
ASKKEKITVDKSLLLSEVNEEAVRGRMWFLPRSCTSTQTNFAEASEHKSDQHILSSSLST
KGNPNGPNQAHFFIGKDMQNRDTDAQKNHTIVAAGAADQGGDATANPSMTGHLQHQLPWF
SPLTQCQSNQDACDSFLNISSTFSTLIISTLLQNPSVHAAACLAASVWPSPEVDTSLHSS
PPVHMKPSPTMTPVVAATVGAATAWWAAQGALPWFPHFTFAFTSAPPTRAQPVEMVQEPE
RRHDASFRKPLNPDLSDEPQCQTSPIPPSSDSDESVRDEYSNCTEVKASEINNSPPLLAG
GVNDLRSKRKQHLSCGSNDTANNETVDKEAEEAFTNTSAPEINHRRLRSSASTDEPWKES
EKGQLAYEAPLKRDLPRSSSPLHAKDAQTKVRSDRDSSMLPANLSENAGLETDLLHPHCL
KKEEMSKEINGSTGQSSVTNDFRHGNSMSSRTGFKPYKRCSVEAKESKAVSGEETGNKKI
RLPEEA
NT seq
2181 nt
NT seq
+upstream
nt +downstream
nt
atgagatacttcttggatcaagttgagcgattggttggatatatggaaggtggatggatg
attcatgtggcggattttaagtccaagtgtccgcggttgctttccacacccccgttctct
gcttcggaagtttcagatcttgaaatggaagaaaaatcttgcggagaaaacatggttgcg
aaggtgaggaagccgtatactattacaaagcagagggagaagtggacagaggaggaacac
aacaggttcctggaagccctaaagctctatgggaggtcatggcaacgcatagaagagcac
attggtacaaaaactgcagtgcagatcagaagccatgcacagaagttcttcacaaagttg
gaaaaagaagctctcatgaaaggtgtttccccaggacaagttcatgacattgatatcccc
cctccacgtcctaaaaggaagccaagcaatccatatccaagaaagatgagcacaggagtt
ccttcgccctctccctctgcagaagctacagatgacaaaccaccaacaccttcctctctc
caacccacaaatcagcattcctttcgcttggaaagtgatgcagccacagagcgtcttgcc
gcaatggaaacagtggcagctaaagagaattttgaagatggcaatcgctcagaagttatt
gacatcaatcaagatgtgccatctgcatccttctttacggaattcatccccacaagtgag
gcatcaaagaaagagaagatcacagttgataaatctttattgctttctgaagtgaatgag
gaggcagtgaggggtaggatgtggtttctcccaagaagctgcacaagtacacaaaccaac
tttgctgaagcaagtgaacacaaatcagatcaacatattctatcatcgagcctctctacc
aaaggtaacccaaatggcccaaatcaagcacattttttcatcggaaaagacatgcagaac
agagacactgatgcacagaagaaccataccatcgttgctgctggtgctgctgaccaagga
ggagatgccactgctaacccatccatgacaggtcacttgcagcatcagcttccgtggttc
tcaccattgacccaatgccagagcaaccaggatgcgtgtgactccttcctcaacatctca
tccacattctcaactctcattatttccaccttgctacagaatccatcagtccatgctgca
gcatgcctggcagcatcagtctggccatcccctgaggtggacacttctcttcattcaagt
ccaccggtgcatatgaagccatctccgaccatgacgcctgttgttgccgctacagtggga
gctgcaactgcatggtgggcagctcagggagccttgccatggtttccacatttcactttt
gccttcacttcagcacctccaacccgagctcaacctgtggagatggtccaagagccagaa
cgacgacatgatgcctcctttcgtaagcctctgaacccagatttatctgatgaaccacag
tgtcaaacttcacctataccaccatcctcagattccgatgagagtgtaagagatgaatac
tctaattgcacagaggtaaaagcttcggaaattaacaactccccaccgttactagctggt
ggagttaatgatttgaggagcaaaaggaagcaacatctttcttgtggatccaatgacaca
gccaacaacgagacagttgacaaagaggctgaagaagccttcacaaatacttcagctccc
gaaatcaaccaccggagacttagaagcagtgcaagcacggacgagccatggaaagaatct
gaaaagggtcagcttgcctatgaagcacctctgaaaagagatctgccccgaagctcttct
cctctgcatgctaaagatgcacaaacaaaggtgaggagcgacagagatagcagcatgttg
ccagctaatctttccgagaacgcaggtttggaaactgaccttcttcatccacattgtctc
aagaaggaagagatgagtaaggaaatcaacggcagcactggacaaagctctgtaactaat
gatttccgacatgggaattccatgtctagtcggacgggattcaaaccatataagaggtgc
tcagtggaagcgaaggagagcaaagcagtatccggagaagaaaccgggaacaagaagata
cgtctgccagaggaagcttga
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