KEGG   Musa acuminata (dessert banana): 103973007
Entry
103973007         CDS       T03447                                 
Name
(RefSeq) protein CCA1 isoform X1
  KO
K12133  MYB-related transcription factor LHY
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus04712  Circadian rhythm - plant
Brite
KEGG Orthology (KO) [BR:mus00001]
 09150 Organismal Systems
  09159 Environmental adaptation
   04712 Circadian rhythm - plant
    103973007
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03000 Transcription factors [BR:mus03000]
    103973007
Transcription factors [BR:mus03000]
 Eukaryotic type
  Helix-turn-helix
   Tryptophan clusters Myb, Myb-factors
    103973007
SSDB
Motif
Pfam: Myb_DNA-binding Myb_DNA-bind_7 Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 103973007
NCBI-ProteinID: XP_009385733
UniProt: A0A804IQH7
LinkDB
Position
BXJ2-4:15714561..15720040
AA seq 726 aa
MRYFLDQVERLVGYMEGGWMIHVADFKSKCPRLLSTPPFSASEVSDLEMEEKSCGENMVA
KVRKPYTITKQREKWTEEEHNRFLEALKLYGRSWQRIEEHIGTKTAVQIRSHAQKFFTKL
EKEALMKGVSPGQVHDIDIPPPRPKRKPSNPYPRKMSTGVPSPSPSAEATDDKPPTPSSL
QPTNQHSFRLESDAATERLAAMETVAAKENFEDGNRSEVIDINQDVPSASFFTEFIPTSE
ASKKEKITVDKSLLLSEVNEEAVRGRMWFLPRSCTSTQTNFAEASEHKSDQHILSSSLST
KGNPNGPNQAHFFIGKDMQNRDTDAQKNHTIVAAGAADQGGDATANPSMTGHLQHQLPWF
SPLTQCQSNQDACDSFLNISSTFSTLIISTLLQNPSVHAAACLAASVWPSPEVDTSLHSS
PPVHMKPSPTMTPVVAATVGAATAWWAAQGALPWFPHFTFAFTSAPPTRAQPVEMVQEPE
RRHDASFRKPLNPDLSDEPQCQTSPIPPSSDSDESVRDEYSNCTEVKASEINNSPPLLAG
GVNDLRSKRKQHLSCGSNDTANNETVDKEAEEAFTNTSAPEINHRRLRSSASTDEPWKES
EKGQLAYEAPLKRDLPRSSSPLHAKDAQTKVRSDRDSSMLPANLSENAGLETDLLHPHCL
KKEEMSKEINGSTGQSSVTNDFRHGNSMSSRTGFKPYKRCSVEAKESKAVSGEETGNKKI
RLPEEA
NT seq 2181 nt   +upstreamnt  +downstreamnt
atgagatacttcttggatcaagttgagcgattggttggatatatggaaggtggatggatg
attcatgtggcggattttaagtccaagtgtccgcggttgctttccacacccccgttctct
gcttcggaagtttcagatcttgaaatggaagaaaaatcttgcggagaaaacatggttgcg
aaggtgaggaagccgtatactattacaaagcagagggagaagtggacagaggaggaacac
aacaggttcctggaagccctaaagctctatgggaggtcatggcaacgcatagaagagcac
attggtacaaaaactgcagtgcagatcagaagccatgcacagaagttcttcacaaagttg
gaaaaagaagctctcatgaaaggtgtttccccaggacaagttcatgacattgatatcccc
cctccacgtcctaaaaggaagccaagcaatccatatccaagaaagatgagcacaggagtt
ccttcgccctctccctctgcagaagctacagatgacaaaccaccaacaccttcctctctc
caacccacaaatcagcattcctttcgcttggaaagtgatgcagccacagagcgtcttgcc
gcaatggaaacagtggcagctaaagagaattttgaagatggcaatcgctcagaagttatt
gacatcaatcaagatgtgccatctgcatccttctttacggaattcatccccacaagtgag
gcatcaaagaaagagaagatcacagttgataaatctttattgctttctgaagtgaatgag
gaggcagtgaggggtaggatgtggtttctcccaagaagctgcacaagtacacaaaccaac
tttgctgaagcaagtgaacacaaatcagatcaacatattctatcatcgagcctctctacc
aaaggtaacccaaatggcccaaatcaagcacattttttcatcggaaaagacatgcagaac
agagacactgatgcacagaagaaccataccatcgttgctgctggtgctgctgaccaagga
ggagatgccactgctaacccatccatgacaggtcacttgcagcatcagcttccgtggttc
tcaccattgacccaatgccagagcaaccaggatgcgtgtgactccttcctcaacatctca
tccacattctcaactctcattatttccaccttgctacagaatccatcagtccatgctgca
gcatgcctggcagcatcagtctggccatcccctgaggtggacacttctcttcattcaagt
ccaccggtgcatatgaagccatctccgaccatgacgcctgttgttgccgctacagtggga
gctgcaactgcatggtgggcagctcagggagccttgccatggtttccacatttcactttt
gccttcacttcagcacctccaacccgagctcaacctgtggagatggtccaagagccagaa
cgacgacatgatgcctcctttcgtaagcctctgaacccagatttatctgatgaaccacag
tgtcaaacttcacctataccaccatcctcagattccgatgagagtgtaagagatgaatac
tctaattgcacagaggtaaaagcttcggaaattaacaactccccaccgttactagctggt
ggagttaatgatttgaggagcaaaaggaagcaacatctttcttgtggatccaatgacaca
gccaacaacgagacagttgacaaagaggctgaagaagccttcacaaatacttcagctccc
gaaatcaaccaccggagacttagaagcagtgcaagcacggacgagccatggaaagaatct
gaaaagggtcagcttgcctatgaagcacctctgaaaagagatctgccccgaagctcttct
cctctgcatgctaaagatgcacaaacaaaggtgaggagcgacagagatagcagcatgttg
ccagctaatctttccgagaacgcaggtttggaaactgaccttcttcatccacattgtctc
aagaaggaagagatgagtaaggaaatcaacggcagcactggacaaagctctgtaactaat
gatttccgacatgggaattccatgtctagtcggacgggattcaaaccatataagaggtgc
tcagtggaagcgaaggagagcaaagcagtatccggagaagaaaccgggaacaagaagata
cgtctgccagaggaagcttga

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