Musa acuminata (dessert banana): 103973674
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Entry
103973674 CDS
T03447
Name
(RefSeq) DNA excision repair protein CSB
KO
K10841
DNA excision repair protein ERCC-6
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
103973674
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mus03036
]
103973674
03400 DNA repair and recombination proteins [BR:
mus03400
]
103973674
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Chromatin remodeling factors
B-WICH complex
103973674
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
Other TCR factor
103973674
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
Helicase_C
HDA2-3
ResIII
AAA_34
Motif
Other DBs
NCBI-GeneID:
103973674
NCBI-ProteinID:
XP_009386580
UniProt:
A0A804J5R4
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All DBs
Position
BXJ2-5:complement(33916313..33924615)
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AA seq
1201 aa
AA seq
DB search
MEEEDEDKLLLSSLGITSANPEDIERKILSQAKNDTTYASEPGESSHDYEPDETGPLPTR
VKLYNKLRALEVEIDAVASSIGSAKCIEVDGSGNSDSTSDRGDKPVENIGYDVHAPSSNL
CLEQALATDRLRDLKKAKAQLQKKISLFGDYAFANDIEHEKHNVELLDELVKERPKQKPK
HKQKLKSNGHSKRPLKAVAYDEDADFDTVLDAASAGFMETERDKLVRRGILTPFHKLKGF
ERRVQERGPPIRQDVPEEDSTENLASTSIARAAQSISQIALARPTTKLLDAEALPALEPP
TRPFQRLRGPLKRARSSRKKELDKNERNIKRTRRPGPEKRWRKDDLTNESLDGSEEDTRR
GSSASDCEEELQDEAENKDQSSVVFEGGLKMPGVIYSKLFDYQKVGVQWLWELHCQRAGG
IIGDEMGLGKTIQVISFLGALHFSKMYKTSIVVCPVTLLRQWQREVKKWYPDFKVEILHD
SAYAITKQKLVKSSESDYDSESSLGSDSERPCPVKSTKKWDYMIDRIVKSESGLLLTTYE
QLRLMGEKLLDIEWGYAVLDEGHRIRNPNAEITLVCKQLQTVHRIIMTGAPIQNKLGELW
SLFDFVFPGKLGVLPVFETEFAVPITVGGYANATPLQVSTAYRCAVVLRDLIMPYLLRRM
KADVNAQLPKKTEHVLFCSLTPDQRSVYRAFLASSEVEQIFDGIKNSLYGIDVMRKICNH
PDLLEREHAAQNPDYGNIERSGKMKVVSQILNVWKEQGHRVLLFAQTQQMLDIIESFLTA
SGYSYRRMDGFTAVKQRMALIDEFNNSEEVFVFILTTKVGGLGTNLTGADRVIIYDPDWN
PSTDMQARERAWRIGQKRDVTVYRLITRGTIEEKVYHRQIYKHFLTNKILKNPQQRRFFK
ARDMKDLFTLQDDQGDLTETSNIFSQLSEEIHVGVTDGYQGKQGSSPSGIRESTNQIDGG
KDEETNILKSLFDVHGIHSAMNHDAIMNANEDFKMKMEEQASQVAQRAAQALRESRMLRS
RESFAVPTWTGRAGAAGAPSSTRNRFGSTLNTQLLGPGKPSEGSASRPPGFSAGASTGKA
LSSVELLARIRGTQERAVSDALEQDLDLASTSNHQHGKPESSHSTKPPSKLVIAQPEVLI
RQLCTFIQQRGGSTDSASITQHFKDKIQSKDLPLFKNLLKEIATLEKDASGSRWVLKSEY
Q
NT seq
3606 nt
NT seq
+upstream
nt +downstream
nt
atggaagaagaagacgaagataagcttttgttaagtagcctgggcatcacatcggcgaat
ccggaagatatcgagcgtaaaattctgtcgcaggcaaagaatgacaccacttatgcaagt
gagcctggggagagctcccatgactatgagcctgatgaaactggaccattgcctacccga
gttaaactctacaataaattgcgtgcattggaagttgaaatcgatgctgtagcttctagc
attggaagtgctaaatgcattgaagttgatggaagtggcaattctgatagcacaagtgac
agaggggataaacctgtggagaatattgggtatgatgttcatgctccttctagcaatttg
tgtctggaacaggcacttgcaacagatcgtctaagagatcttaagaaagcaaaggctcag
ctgcaaaaaaaaatttctctgtttggtgactatgcttttgctaatgacattgagcatgaa
aaacacaacgtggagctgcttgatgagttggtcaaagaaagaccaaaacaaaaaccaaag
cataagcagaaactaaaatcgaatggacactcaaaacgacctctgaaagctgttgcctat
gatgaagatgctgattttgatacagttcttgatgcagcctctgctgggtttatggaaact
gagagagataaattggttcgaaggggtatcttaacaccatttcataagcttaaaggcttt
gaacgtcgtgtccaagaacgtggacctccaatcaggcaagatgtacctgaggaagactca
actgaaaatcttgcatcaaccagcattgctagagctgctcaatcaatttcccagattgca
ttggctcgaccaacaaccaaattgctagatgcagaggctttgcctgcactggaaccacct
actcgcccgtttcaaagacttcgagggcctctaaaacgtgcaagatcctcaagaaaaaaa
gaattggataagaatgaaagaaatataaagaggacaagaaggcctggacctgagaaaaga
tggagaaaggatgatttaaccaatgagtcactggatggaagtgaggaagacacaaggaga
ggttcgagtgcctctgattgtgaggaagaattgcaagatgaggcagaaaacaaggaccag
tcatctgtagtctttgaaggaggcttgaaaatgcctggtgttatttattcaaaacttttt
gattatcaaaaggtaggagttcagtggctgtgggaattgcattgccaaagagctggtggc
atcattggagatgagatgggtctgggtaagaccatccaggtcatctcatttcttggcgct
cttcattttagtaaaatgtataaaaccagtattgttgtttgtcctgtgacccttctgaga
caatggcaacgggaggttaagaaatggtaccctgactttaaagttgagatactgcatgat
tctgcgtatgctataactaaacagaaattggtcaaatctagtgaaagtgattatgatagt
gaatcttcattaggtagtgatagtgaaagaccttgccctgtaaaatcaacaaaaaaatgg
gattatatgattgatcggattgtgaaatctgaatcaggattgcttctgactacatacgag
caattacgccttatgggtgagaagttgcttgatatagaatggggatatgcagttttggat
gagggtcatcgaataagaaatccaaatgctgagataactttagtttgtaaacaactacag
actgtgcatcgcataattatgactggtgcaccaattcaaaacaaattaggagaattgtgg
tctctttttgattttgtattccctgggaaattaggtgtcttgcctgtgtttgagacagag
tttgcagttccaattacagtgggtggatatgctaatgctacgccactgcaggtgtcaaca
gcttatagatgtgcagttgtcttacgtgatttgatcatgccataccttcttaggcgtatg
aaagctgatgtgaatgctcagctacccaagaaaactgaacatgtccttttctgcagccta
accccagaccagcgatctgtgtatcgggcatttcttgctagctctgaggtggagcaaatt
tttgatggaataaaaaactcgttatatgggatagatgttatgcggaagatctgcaatcat
cctgatctattggaaagagaacatgctgctcagaatccagattatgggaatattgaacga
agtggaaagatgaaagttgtttcgcagattcttaacgtttggaaggagcaaggacatcgt
gttcttctttttgcacaaactcaacaaatgctagatattatagagagctttcttactgca
agtggttatagctatagaagaatggatggatttactgcggtaaagcagcggatggcactt
atagatgaatttaataactctgaggaggtcttcgtcttcatcttaactactaaagttggt
ggtttgggaacaaatttgacaggcgctgacagggtcattatatatgatcctgactggaat
ccttcaactgatatgcaggcaagagaacgggcttggcggattggacagaaacgggatgta
acagtttacagattgataacacgtggaaccatagaggagaaggtataccacaggcaaatc
tacaagcattttctcaccaacaagatcttgaagaatcctcaacaaaggcgattcttcaaa
gcaagagacatgaaggatctattcaccttgcaagacgatcaaggggatttgaccgagaca
tcaaatattttcagtcagttatccgaagagatccatgtaggtgttaccgatggttaccaa
ggaaaacaaggatctagcccaagtggcataagggagagcactaatcaaattgatggcggt
aaagatgaggaaacaaatattttgaaaagtcttttcgatgtccatggtattcatagtgca
atgaaccatgatgccattatgaatgctaatgaggattttaagatgaagatggaggagcaa
gcttcccaagtagcacagagggcagctcaagccttgcgggagtcacgaatgcttcgaagt
cgtgaaagttttgctgttcccacatggactggaagagctggcgctgctggggctccatca
tctacccgtaataggtttggatctactttaaatacacagctgctgggccctgggaagccc
agtgaaggatctgctagtaggcctcctggtttctcagctggagcttcaactggtaaagca
ctatcatcagttgaactcttggctaggattcgtggaactcaagagagggctgttagtgat
gccctcgagcaagatctggatttggcttctacgtccaatcaccaacatggaaagccagaa
agcagtcattcaacaaagccgcccagtaaactcgtgatagcgcagcctgaggtcctgatc
cggcagctctgcactttcatacagcagagaggtgggagcaccgattctgcaagcataaca
caacatttcaaggacaagatacaatcaaaagatttgcctctcttcaaaaatcttctcaag
gaaatagcaacattggagaaggatgccagtggatccagatgggttttgaaatcagagtat
cagtga
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