Musa acuminata (dessert banana): 103974333
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Entry
103974333 CDS
T03447
Name
(RefSeq) F-box protein SKP2A
KO
K03875
F-box and leucine-rich repeat protein 1 (S-phase kinase-associated protein 2)
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
103974333
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103974333
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103974333
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GFIT
Motif
Pfam:
LRR_6
LRR_At5g56370
LRR_4
F-box-like
F-box
LRR_NXF1-5
LRR_8
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
103974333
NCBI-ProteinID:
XP_009387409
UniProt:
A0A804HMW4
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Position
BXJ2-4:complement(22227287..22231792)
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AA seq
368 aa
AA seq
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MAGGSPASVDLEVWFNSLIVSGDGGKMERSAVAIAGWKDLPTELLLRILSLLDDSTVFVA
SSVCKGWRIALCLGLTSFSLSWCKNNMNNLVQSVIPKFVKLQVLSLRQNYRLQLEDGAVE
TISNYCHDLKDLDLSKSRKLSDRSLYNLAHGCPCLTKLNISGCSAFSDSALAHLASCCRN
LKYLNLCGCVKATSDKALQAISYHCNELQSLNLGWCDCVTDKGVTSLATGCPNLRALDLC
GCVLITDESVIALANGCPHLRSLDLYYCQNITDRAMYSLANSCVNHNHGSRRISSIDKGG
LMNLNISQCTALTPPAVQAVCNSFPELHTCPERHSLIISGCLSLTSVHCACAIQANRASR
TALANHAY
NT seq
1107 nt
NT seq
+upstream
nt +downstream
nt
atggctggtgggagtcccgcgtccgtagatttagaggtgtggttcaatagcctcatagtt
tcaggtgacggggggaagatggagaggtcagcagtggctattgcaggttggaaggaccta
cctacggagctgctgcttagaattctttcgctcctcgatgatagcaccgtgtttgtggct
tcgtctgtttgcaaaggctggaggattgccctgtgcctggggcttacaagtttctcccta
tcatggtgcaaaaataacatgaacaatctcgtgcaatcagtcatccccaagtttgtgaag
ctgcaggttttatctcttcgacaaaattacagacttcaactcgaggatggtgctgttgag
acaatttctaattattgccatgacttgaaggatttagaccttagcaaaagccgtaaactg
agcgatcgctctttatataatttggcccatggatgcccctgtctaacaaagctcaacatc
agtgggtgctcagcttttagtgattctgcccttgcacatctagctagttgctgtagaaac
ctaaaatatttgaatctttgtggatgtgtgaaggctacatctgacaaagctctacaggct
atttcataccattgcaatgagttgcaatctttgaatctgggttggtgtgactgtgtcact
gacaaaggagttaccagtttggccacaggctgccccaatcttcgggctttggacttgtgt
ggttgtgtccttatcacagatgaaagtgtgattgcactagcaaatggttgtcctcatcta
agatctctggacttgtattactgccagaacatcaccgacagggctatgtattcactagca
aatagctgtgtgaaccataaccatggatcacggcgaatcagcagtatcgacaagggtggt
ctgatgaacctcaatatcagccagtgcacggctttaacaccacctgctgttcaagctgtc
tgtaactcatttccagaactgcatacctgccctgagaggcattcactcatcatcagtggc
tgtctcagccttacttctgtgcactgtgcttgtgccatccaagccaaccgagcaagtagg
actgctttggcaaaccatgcttactga
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