Musa acuminata (dessert banana): 103974683
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Entry
103974683 CDS
T03447
Name
(RefSeq) nuclear cap-binding protein subunit 1
KO
K12882
nuclear cap-binding protein subunit 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103974683
09122 Translation
03013 Nucleocytoplasmic transport
103974683
03015 mRNA surveillance pathway
103974683
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103974683
03041 Spliceosome [BR:
mus03041
]
103974683
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA processing factors
5' end processing
Cap binding complex
103974683
Spliceosome [BR:
mus03041
]
Common components
Common spliceosomal components
Cap binding complex
103974683
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MIF4G_like
MIF4G_like_2
MIF4G
YqcI_YcgG
DUF2237
Motif
Other DBs
NCBI-GeneID:
103974683
NCBI-ProteinID:
XP_064964302
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All DBs
Position
BXJ2-5:5713309..5743664
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AA seq
857 aa
AA seq
DB search
MSSWQTLLLRVGDKCPEYGGAVDYKEHIETCYGVLWREFEHSKDEISELLLQCAEQLPHK
IPFYGVLVGMINLEDEDFGKNIVDDLHCKLQEALSSENCDKIRTLMRFLTVLMCSKVILP
SSVIEVFETLLSSAATIIDEDAGNPSWQPCADFYITCILSCLPWGGTELIEQVPDEFDRV
IVGIQSYLSIRKHSQDTSFIVFEADEDKSAKEKDFVEDLWDHIQILSTNGWKVDSVPRPH
LSFEEQLVSGKSYNLSPISCPKQSTSSSRSTISRERENYEAKLKYPQRLRRLHIFPSNKI
EKMQPIDRFIVEEYLLDVLLYFNGCRKECASYMASLPVPFRYEYLMAETIFSQIMFLPQP
PFKPIYYALVIIDLCKALPGAFPAVVAGAVRSLFNRIGDLDMECRTRLILWFSHHLSNFQ
YFWPWEEWAHVKDLPIWAPQRVFVQEVLEREVRLSYWDKIKQSIENAPELEELLPPKSVS
SFKYNSEEDHGYTLSKEFREMVRGRKTAREITSWVEENIIQIHGSKFAIEVVIQTLLDIG
SKSFTHLITVLERYGQVIAKLCTDQNMQVLLIDEVSSYWKNNTQMTAIAIDRMMGYRIIS
NLAIVSWVFSLSNIEQFHVSDRPWEILRNAINKTYNRIADLRKEIQTLKKSVLLAEDVAV
KALKEFEAAETRLEVVDGQPVQAEKPGRLKRLKGYAEKAKDDEIAVREALEAKDALLARA
LEENKSLFVSLYKSFANVLTERLPPVSADGAFPKLRDEEDIDSMAIDLEESSTMEMDHDN
RRKDDRNGEKVTHRYSLKEQDQWCLCTLGYVKAFSRQYATEVWPHLETLEAEVFGGDIHP
LFRKAVFSGLCRSTTEM
NT seq
2574 nt
NT seq
+upstream
nt +downstream
nt
atgagcagctggcagactcttctcctgagggtcggcgacaaatgtcccgagtacggcggc
gccgtcgactacaaagaacacattgaaacatgttatggtgtgctctggcgagaatttgaa
cattccaaagatgaaatatctgagcttcttcttcagtgtgccgaacagttgccgcataaa
attccattttatggagtgttggttggtatgataaatttagaggatgaggactttggaaaa
aacattgtggatgatctacactgcaagctacaggaggcattgtcttcagaaaattgtgac
aagattcgtacattgatgaggtttctgacagttctgatgtgcagcaaagttatcctgcct
agttcagttattgaagtctttgagacacttttatcatctgctgccacaattatcgatgag
gatgctggtaatccttcttggcaaccatgtgctgacttctatataacctgcattttgtcc
tgtctcccgtggggaggcacagaattgattgagcaagttccagatgagtttgatcgagtc
attgttggaatacaatcttatttaagcatcaggaagcattctcaagatacaagttttatc
gtttttgaagcggatgaagacaaatctgctaaagaaaaggattttgtggaagatttatgg
gatcatatacaaattctttccactaatggatggaaggttgatagtgttccaagacctcat
ctatcatttgaagaacagttggtctctggaaagtcttataatctttctcctattagctgc
cctaagcaatctacatcatcatcacggtctacaatttctagagaaagagaaaattatgaa
gctaagttaaagtatcctcaacggcttcgtcgacttcacatatttccttcaaacaaaatt
gagaaaatgcaaccaattgatcggttcattgttgaagagtatttgttggatgtgctgctt
tacttcaacggatgccggaaggaatgtgcttcttacatggctagcctgcctgtgccgttc
cgctatgaatatctgatggcagagacaatattttcacagataatgttccttcctcaacca
ccattcaaacccatctactatgcgttagttatcattgatctttgtaaggcattgcctggt
gcattccctgctgttgtggcaggagctgtgcggtctctttttaatcgaattggtgatctg
gatatggaatgtcgcactagactgatcctatggttttctcatcatttgtcaaattttcaa
tacttttggccttgggaagaatgggctcatgttaaagatcttccaatatgggccccacaa
agggtttttgtacaagaagtgttggaaagggaagttcgcctatcatactgggacaaaatc
aagcagagcattgagaatgcacctgaacttgaagagttgcttccaccaaagagtgtatct
agcttcaagtacaattctgaagaagatcatggctatacactttctaaggagttccgtgaa
atggttcgaggaaggaagactgcccgtgagattacttcatgggtagaggaaaatataatt
caaattcatggctcaaagtttgcaattgaagttgtaattcagacccttctggatattggt
tcaaagagtttcactcatctgatcactgtcttggagagatatggtcaagtcattgctaaa
ttgtgcactgatcaaaatatgcaagtgttgttaatagatgaagtgagttcctactggaag
aataatactcagatgactgctatagccattgatcggatgatgggttaccgaattatatcc
aatttggctattgttagctgggtcttttctctttccaatattgaacaattccatgtttca
gatcgtccatgggagattcttaggaatgccatcaacaagacttacaaccgcatcgctgat
cttagaaaggaaattcaaacacttaagaagagtgttttgttagctgaggatgttgcagtg
aaggctttaaaggagtttgaggctgctgaaacacggctcgaggttgtggatggtcaacct
gtccaagctgaaaaaccaggaagattgaagcgcctaaaaggatatgctgagaaggcaaaa
gatgatgagatagctgtaagagaagctttggaagccaaggatgctctccttgctcgagca
cttgaagaaaataagagtttatttgtatcactatataagagctttgcaaatgtgcttacg
gaacgcctgcctcctgtgtctgctgatggagcttttcccaaactacgggatgaggaagat
atagattccatggcgattgatttggaggagtcatctaccatggagatggaccatgataac
aggagaaaggatgataggaatggtgaaaaggtaactcatcgctacagtcttaaagaacaa
gaccagtggtgcctatgcacattgggttacgtcaaagcattttcaaggcagtatgcaaca
gaggtttggccacatcttgaaacactggaagctgaggtgtttggtggagatatccatccg
cttttcaggaaagctgtcttttctggtttatgccgatcaaccacagaaatgtga
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