KEGG   Musa acuminata (dessert banana): 103975523
Entry
103975523         CDS       T03447                                 
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB7 isoform X1
  KO
K03015  DNA-directed RNA polymerase II subunit RPB7
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03020  RNA polymerase
mus03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103975523
  09124 Replication and repair
   03420 Nucleotide excision repair
    103975523
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mus03021]
    103975523
   03019 Messenger RNA biogenesis [BR:mus03019]
    103975523
   03400 DNA repair and recombination proteins [BR:mus03400]
    103975523
Transcription machinery [BR:mus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol II specific subunits
     103975523
Messenger RNA biogenesis [BR:mus03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   mRNA cycle factors
    P-body specific factors
     103975523
DNA repair and recombination proteins [BR:mus03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    TCR (transcription coupled repair) factors
     DNA-directed RNA polymerase II complex
      103975523
SSDB
Motif
Pfam: SHS2_Rpb7-N S1
Other DBs
NCBI-GeneID: 103975523
NCBI-ProteinID: XP_009388792
LinkDB
Position
BXJ2-4:34226025..34230307
AA seq 193 aa
MFFHITLERNMQLHPRHFGPHLRDKLVAKLMKDVEGTCSGRHGFVVAITGVEDIGKGLIR
EGTGFVTFPVKYQAVVFRPFKGEILEAVVTMVNKMGFFAEAGPVQIFVSNHVCGIKNAYQ
YKSCSCSLIPDDMEFQSGDMPNYTTSDGSVKIQKDSEVRLKIIGTRVDATEIFCIGTIKD
DFLGVINDPGASA
NT seq 582 nt   +upstreamnt  +downstreamnt
atgttcttccacataactttggagcgcaacatgcagctccacccacgtcacttcggtccc
cacctccgcgacaagctcgtcgccaagcttatgaaggacgtcgagggcacctgcagtggg
cggcacgggttcgtggtggccatcacgggggtggaggacatcgggaaggggctcatccgc
gagggcactggcttcgtcaccttccccgtcaagtatcaggccgtggtcttccgcccgttc
aagggcgagatccttgaggccgtcgtcaccatggtcaacaagatgggtttctttgccgaa
gcagggcctgtccagatcttcgtatcgaatcatgtgtgtggaattaagaacgcctatcag
tataaatcatgtagttgttcattgatcccagatgatatggagttccagtctggagatatg
ccaaattacacaacatctgatggatctgtcaaaattcagaaagacagcgaggttcgatta
aagattattgggactcgtgttgatgccacagaaattttttgcattggcaccataaaagat
gatttcttgggtgtcatcaatgatcctggtgcttctgcttaa

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