Musa acuminata (dessert banana): 103975701
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Entry
103975701 CDS
T03447
Name
(RefSeq) E3 ubiquitin protein ligase RIN3
KO
K10636
E3 ubiquitin-protein ligase AMFR [EC:
2.3.2.36
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103975701
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103975701
Enzymes [BR:
mus01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.36 RING-type E3 ubiquitin transferase (cysteine targeting)
103975701
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Other single Ring-finger type E3
103975701
Multi subunit type E3
ERAD complex
103975701
LMBR1L-GP78-UBAC2 complex
103975701
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_SYVN1_N
zf-RING_2
zf-C3HC4
CUE
zf-rbx1
zf-RING_UBOX
zf-RING_11
zf-ANAPC11
zf-C3HC4_2
zf-C3HC4_3
zf-RING_16
zf-RING_5
zf_RING_Vps8_fungal
Prok-RING_4
E3_UbLigase_EDD
RINGv
PHD
zf-C3HC4_4
zf-RING_Vps41
Motif
Other DBs
NCBI-GeneID:
103975701
NCBI-ProteinID:
XP_009389021
UniProt:
A0A804IT90
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Position
BXJ2-4:complement(34033290..34052690)
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AA seq
581 aa
AA seq
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MAMNYLYLSVFSTAASIVGLQWWTVSSLDGMKSDGLITSDGGGGSKESAGRALELLLSSH
VTVALLANFVINVYVLVVLLLKTLFFVQLNTSETRKVLERFVNYIIYKGTFLPLVVPPNV
SQVILWTSWLVFLCSLKIFESLARDRLERLNASPSVTPSKYFRVFSALLVVLSADFLWMK
LCMMIYSSYSYSLFMLLFFEPLCIASETFQAIMVHGFQLLEIYQRHSSESTVGCSDYIQK
TAAGSLSEWKGILIRHCGFILDMLALVMALGHYLMTWWLHGMAFHLVDVILFLNLRALAS
AIVKRIRTYINLRKALSSLDGALPDATYEELCAYDDECAICRGPMTRAKKLPCNHLFHLV
CLRSWLDQGLTEVYSCPTCRRPLFVSNPQGDTRSVPGNGVDDQQLAEHLSLRLNQQRIPG
QALPLGSSPNQQQNTSDTIWRGAAFDSSLAPPWVNQGVDGASSSSSVRPVGFGGVQMMMR
QLASVSENFAHGSLDDAAWNLWSSQHTSIPSIPSSASIRLNRNAAGQRIRNASPSVNNMS
ELLAMVDRVREVLPHIPDELIVQDLLRSNNINITVNNLLMQ
NT seq
1746 nt
NT seq
+upstream
nt +downstream
nt
atggcgatgaattacctgtacctttctgtcttcagcaccgcggccagcatcgtcgggctg
cagtggtggacggtctcctcgcttgacgggatgaagtccgatgggttgatcacttctgac
ggcggtggaggctccaaggagagcgctgggcgagcgctggagctgctgctcagctcgcat
gtcaccgtggctctgctggcgaattttgtgatcaatgtgtacgttctggtcgtgttgctg
ctcaagactctattctttgtgcagttgaacacatcagagactagaaaagttttggaacgt
tttgttaattacataatatacaagggaacctttcttccattggttgtgccacctaatgtt
tctcaagtcatcttatggacaagctggttggtctttctatgttccctcaagatttttgaa
tcattagcaagagataggcttgaaaggctaaatgcatctccttccgtgacaccttcaaag
tactttcgtgttttttctgccttgttggtggttctttctgctgatttcctatggatgaag
ctgtgtatgatgatctacagttcatacagttatagcttgtttatgctgttgttctttgag
cctctttgtatagcttctgagacatttcaggccattatggtacatgggtttcagttgctt
gaaatttatcaacggcattctagtgaaagtactgtcggttgctcagactacattcaaaaa
acagcagcaggttccctctctgaatggaaagggattctcataagacactgtggtttcatt
ctagatatgttggctttagtaatggcactaggtcattacttaatgacctggtggcttcat
ggcatggcatttcatctagtggatgtcattctttttctgaacttgcgtgctcttgccagt
gcaattgtgaagagaatcagaacatatatcaatttaaggaaagcccttagttcccttgat
ggagcacttcctgatgcaacatatgaagaactttgtgcctatgatgatgaatgtgcaata
tgcagaggaccaatgacaagggctaaaaagttaccatgcaatcatctattccacctagtg
tgtttgaggtcttggttggaccagggtttgactgaagtgtattcttgccctacatgtcgg
aggcctctttttgtttctaatcctcaaggtgacacaaggtccgttcctggaaatggagta
gatgaccagcaacttgctgaacatctaagtttaagattgaaccaacagaggattcctggt
caagcactacctctaggatcatctccaaaccagcaacagaatacttctgatacaatctgg
aggggagctgcatttgattccagtttggcacctccatgggtgaatcaaggagtggatggt
gctagttcatcaagttcagtcagaccagtaggttttggtggggttcaaatgatgatgagg
caactagcgtctgtcagtgaaaacttcgctcatggttctctagatgatgctgcttggaat
ctatggtcttctcagcatacctcaattccttctattccttcatctgcttccattaggttg
aacagaaatgctgctggtcaacgtattaggaatgcttcaccctctgtaaacaatatgtca
gagttacttgctatggtagatagagtacgtgaggttttgccacacattccggatgaactt
attgtacaggatttgctgagaagcaacaacatcaatattactgtgaataatcttcttatg
cagtaa
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