Musa acuminata (dessert banana): 103976716
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Entry
103976716 CDS
T03447
Name
(RefSeq) formin-like protein 20
KO
K12875
apoptotic chromatin condensation inducer in the nucleus
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03015
mRNA surveillance pathway
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103976716
09122 Translation
03013 Nucleocytoplasmic transport
103976716
03015 mRNA surveillance pathway
103976716
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103976716
03041 Spliceosome [BR:
mus03041
]
103976716
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
103976716
Spliceosome [BR:
mus03041
]
Complex C
Other components
EJC/TREX
103976716
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RRM_ACIN1
RSB_motif
SAP
LmeA
DUF6786
Motif
Other DBs
NCBI-GeneID:
103976716
NCBI-ProteinID:
XP_009390294
UniProt:
A0A804I694
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Position
BXJ2-2:complement(34285661..34294750)
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AA seq
694 aa
AA seq
DB search
MASQYPVLNNRPIDQWKVTELKEELRRRKIPVRGLKEELVRKLFEAIRNEEVIKEQETGD
QVQSDCPDPTLDGDGDQKQAENSAADHTNIVPDPIGQGHCDASAIDINCSDVIPDPVGKT
DCDATITDIDINREIKVQDAITAISGLDVTVMETQANTVLLEDSTTESQTVITQYDSRVM
VSRAEEKQAEEKQEDSNVPDEDIKPSLSDLDNQVSVVSPDLGFQVKCESIPIDSVSIVEK
NKLKDNLNADDFHLEQEVVKPEMVQPSSSSVPSVGGDLQSLGDGKELQSLDDDKDLQSSG
DDKEQVKHLVSLEDTDVKSSTNFNLSKEDNIDEGSPEKLNLDRCSSDELMEEDVLESKQI
DPNMKSEELAEKTEVKQEPAIGARTNIKDGLGESIPDNKDTVDEDHRKPEGSTEKRKLED
QEAVGSSEPPKRQRRWNSETIKVPEQASNLGTSSTPKDAFQPTPRRIFPKSDSKPSGDAQ
KERIVPPSQKPATTSLRIDKFLRPFTLKAVQELLAKTGTVCSFWMDHIKTHCYVTYSSVD
EANATRNAVYNLQWPPNGGNLLIAEFVDPQEVKARVEAPPQSPAPISPSPTAAKATNFQP
PQAAQPPTRQHSFRQQLPPPLAKPPTLSDAPTVRERLPPPPPPPSTEPEPPALTLDDLFR
KTKATPRIYYLPLSEEVVASKLAAQGKSSSSIKG
NT seq
2085 nt
NT seq
+upstream
nt +downstream
nt
atggcatcacaatatccggtgctcaacaacagacccattgatcaatggaaggttacagag
ttaaaagaagagctgaggaggaggaaaatccctgtaaggggtctgaaggaggaactggta
aggaagttatttgaagcaattcgcaatgaagaggtgatcaaagagcaagaaactggtgat
caagtgcaatcggattgtcctgatccgactcttgatggtgatggcgatcaaaagcaagca
gaaaactcagcagcagatcataccaacattgttccggatccaattggacagggtcactgt
gatgccagtgctattgacatcaattgttcagacgtcattccggatccagttggaaaaact
gactgtgatgccactatcactgacatcgacatcaatcgagagatcaaggttcaagatgcc
ataacagctatttcaggattggatgtgacagttatggaaacacaagccaatacagttctg
ttggaagacagtacaactgaaagccagactgtgatcactcagtacgactcccgtgtcatg
gtttcaagagctgaagaaaaacaagcggaagaaaagcaagaagactcgaacgtacccgat
gaggatatcaagcccagcctttcagatttggacaatcaggtatctgtggtcagcccagat
ttaggtttccaggttaagtgtgagtcaattcctattgattctgtgtcaattgttgaaaag
aataaactaaaggataatttaaatgctgatgactttcatttagagcaagaagttgttaag
ccggagatggttcaaccatcatccagcagtgttccttccgtaggtggcgatttgcagtca
ctgggtgatggtaaagagctgcagtcgttggatgatgataaagacctgcagtcatcgggt
gatgataaagagcaagtaaagcacctagtctctttggaagatacagatgtcaaaagcagt
acaaatttcaatctcagcaaggaagataacatagatgaaggatctccagaaaaattgaac
ttggataggtgttcgagtgatgaattgatggaggaggatgtcttggaaagcaagcaaatt
gatcccaacatgaagtctgaggaactggcagaaaaaactgaggtgaaacaggagcctgct
ataggagcgagaacaaatattaaagatgggttgggtgagtctattccagacaataaagat
actgttgatgaagaccataggaagccagaaggttctaccgaaaagagaaaactagaagac
caagaagctgttggaagcagtgagcctccaaagaggcaacgccgctggaattcagaaacc
ataaaagttcctgaacaagcatccaatcttggtacatcaagtacacctaaggatgcattt
caaccaactcctagacggatattcccgaagtctgattcaaagcccagcggagatgcccag
aaggaacgcattgtgcctccatcacagaagcctgcaaccacttcactgagaattgacaag
ttcttgcgtcccttcactttgaaagcagttcaagaactgcttgcaaaaactggaaccgtc
tgcagtttctggatggaccacatcaaaacccattgctatgtgacctattcttcggtggat
gaagccaatgctacacgaaatgctgtttacaatctccagtggcctcccaatggtgggaat
cttctgatcgcagagtttgttgatccccaagaagtcaaggcacgtgttgaggccccacca
caatcaccggcacctatcagcccaagcccgaccgcagccaaggctacaaactttcaacca
cctcaggcagcccaaccccctactcgtcaacattcttttaggcagcagctgcctcctccc
cttgcaaaacctccgacactgtctgatgcacctaccgtaagagagcgacttcccccgcca
ccgccgccaccttccacggagccagaaccacctgcattgacacttgatgatctctttcga
aaaaccaaggctacccccaggatctattacttacccttgtccgaagaagtggtagcatcc
aagcttgcagcacagggcaaaagcagcagcagcatcaagggatag
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