Musa acuminata (dessert banana): 103976803
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Entry
103976803 CDS
T03447
Name
(RefSeq) serine/threonine protein phosphatase 2A 55 kDa regulatory subunit B beta isoform isoform X1
KO
K04354
serine/threonine-protein phosphatase 2A regulatory subunit B
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
103976803
09180 Brite Hierarchies
09181 Protein families: metabolism
01009 Protein phosphatases and associated proteins [BR:
mus01009
]
103976803
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103976803
03036 Chromosome and associated proteins [BR:
mus03036
]
103976803
Protein phosphatases and associated proteins [BR:
mus01009
]
Protein serine/threonine phosphatases
Phosphoprotein phosphatases (PPPs)
Protein phosphatase-2 (PP2A)
Regulatory subunits
103976803
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Protein phosphatase 2A
103976803
Chromosome and associated proteins [BR:
mus03036
]
Eukaryotic type
Centromeric chromatin formation proteins
Other centromeric chromatin formation proteins
PP2A (protein phosphatase 2A)
103976803
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
WD40_Prp19
WD40_CDC20-Fz
WDR55
Beta-prop_EML_2
Motif
Other DBs
NCBI-GeneID:
103976803
NCBI-ProteinID:
XP_018677901
LinkDB
All DBs
Position
BXJ2-2:complement(34956316..34970746)
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AA seq
508 aa
AA seq
DB search
MTSSMRSFNWKFSQVFGERQPGEKVEEIDIISAVEFESRGDYLATGDHGGRVVLFERTNG
KDLRSRKELEHTDSSVTSHPLYSYKTEFQSHEIEFDYLKSLEIGEKINKLRWCASSNNSL
FILSTNDRTIKLWKVSDRRVKKIIEMDSNAHISSENALLSEKSFLTDQKIQSVPNGYHLE
WITKKPKSTFPTYKESPKMMFKFGECASSRCRRVYSHAHDYNINSISINSDCETFLSADD
LRINMWNLEVGNQCFNIIDLKPLDMEDLVEVITSAEFHPAYCNLLAYSSSRGFIRLVDMR
QSALCDQNARIFQDRDAHGSRSFFTEIAASISDIKFAKDGRHILTRDYMNLKLWDLHMES
SPIVSFKTHEFLRPKLSELYNGDFIFDKFDCCLSRDGRHFATGTYSNTFKVFCHDGGYTD
GTRLEASKNPNRVSHSQECQKNAGLLTFFARGLHRRGHENSRFDSSDEIPCDLDSKLIHL
AWHPTTNLIACAAKCSLYTYYAESSFNA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
atgacctcgtcgatgcggtcgttcaattggaagttctcccaggtgtttggcgagaggcaa
cccggagagaaggtcgaagaaatagacataatatcagcggtcgagtttgagagtagaggg
gactatcttgcaactggagatcatggtggtcgtgttgtcctttttgaaaggacaaatgga
aaagatctacgatctaggaaagagttggagcatacagactcttctgttacctctcatcct
ctatattcttacaagacagagttccaaagtcatgagatagagtttgattaccttaaaagt
ttggaaattggagaaaagatcaacaagttgagatggtgtgccagctccaataactctctg
ttcattctttctacaaatgacaggacgattaaactatggaaggtttcagatcgtagagta
aagaagattatagaaatggactcaaatgcacatatatcctcagaaaacgcgcttctgtct
gagaagagtttcttgactgaccaaaagatacaatctgttccaaatggttaccatcttgaa
tggataactaaaaagccaaagagtacatttccaacatataaagaaagtcccaaaatgatg
tttaagtttggagagtgtgcctcctcaaggtgtcgaagggtttattcccatgctcatgac
tacaacattaattctatatcaattaatagtgactgcgagacattcttatctgcagatgac
ctcagaataaacatgtggaaccttgaagttggcaatcaatgtttcaacattattgatttg
aagcctttggacatggaggatctcgtagaggtaataacgtcggccgagttccatccagca
tactgcaatctcttagcttacagcagctcaagaggttttatacggttggtcgacatgcgg
cagtcagcattatgcgaccagaatgcaagaatttttcaagaccgtgatgctcatggatct
agatcctttttcacagagatagctgcttctatctctgatataaagtttgctaaagatgga
agacatattttaactcgtgactacatgaacctgaagttgtgggacctgcatatggaaagc
tctcctatagttagttttaagacacatgagtttcttcgtcctaagctatcagagctatat
aatggtgacttcatttttgataaattcgactgttgcctaagcagggatggacgccacttt
gctactggaacatacagcaatactttcaaagttttctgtcatgatggtgggtataccgat
ggtaccagattggaagccagcaaaaacccgaacagggtatcccatagtcaagaatgccag
aaaaatgcaggattgctgaccttctttgctcgtggactccaccggcgaggccatgagaat
tcaaggtttgatagtagcgatgagattccatgtgacttggattcaaaactgatccacttg
gcatggcatcctacaacaaacttgatagcttgtgcagcaaaatgcagcttgtacacgtat
tatgcagagagcagttttaacgcctag
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