Musa acuminata (dessert banana): 103976989 Help Entry 103976989         CDS       T03447                                  Name (RefSeq) DNA ligase 1 isoform X1   KO K10747   DNA ligase 1 [EC:6.5.1.1 6.5.1.6 6.5.1.7] Organism mus  Musa acuminata (dessert banana) Pathway mus03030   DNA replication mus03410   Base excision repair mus03420   Nucleotide excision repair mus03430   Mismatch repair Brite KEGG Orthology (KO) [BR:mus00001]  09120 Genetic Information Processing   09124 Replication and repair    03030 DNA replication     103976989    03410 Base excision repair     103976989    03420 Nucleotide excision repair     103976989    03430 Mismatch repair     103976989  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03032 DNA replication proteins [BR:mus03032]     103976989    03400 DNA repair and recombination proteins [BR:mus03400]     103976989 Enzymes [BR:mus01000]  6. Ligases   6.5  Forming phosphoric-ester bonds    6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)     6.5.1.1  DNA ligase (ATP)      103976989     6.5.1.6  DNA ligase (ATP or NAD+)      103976989     6.5.1.7  DNA ligase (ATP, ADP or GTP)      103976989 DNA replication proteins [BR:mus03032]  Eukaryotic type   DNA Replication Elongation Factors    Other elongation factors     103976989  Prokaryotic type    Elongation factors (archaeal)     Other elongation factors      103976989 DNA repair and recombination proteins [BR:mus03400]  Eukaryotic type   SSBR (single strand breaks repair)    BER (base exicision repair)     Long Patch-BER factors      103976989    NER (nucleotide excision repair)     Other NER factors      103976989    MMR (mismatch excision repair)     Other MMR factors      103976989 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DNA_ligase_A_M DNA_ligase_A_N DNA_ligase_A_C RNA_ligase HTH_36 DUF5562 FGAR-AT_PurM_N-like Motif Other DBs NCBI-GeneID:  103976989 NCBI-ProteinID:  XP_064960893 LinkDB All DBs Position BXJ2-4:complement(32886927..32909657) Genome browser AA seq 750 aa AA seqDB search MLLLRAPFLLWLKFPPLPPCFPSLPFSNPSSRNLFLRCCSTGRAAMSGRRTVADVLMGNA RAAAAAAAKSKKSAPSSAQPEQPSPSPSKKPKTLDGGGQNPKDPPEEKNPTLDLKKKCSD FNPKKAATWKDGEPVPFLFLARALELISNESGRIAITEIICNVFRTVIATTPGDLLATVY LSANRIAAPHEGIELGIGDASLVKALAEAYGRKEEQVKKQLKELGDLGLVAKASRSSQKV MFKPQPLTIAKVFDTFRAIAKESGKDSQDKKRNHIKGLLVAATECEPQYLVRLLQSKMRI GLAEKTVLVALGQAAIYSETNQNPRSQTQSDLEEAAKIIKQVYSVLPIYDKIVPELLRVG VWKLPEACNFSLGVPVGPMLAKPTKAVSEILDKFQGMEFTCEYKYDGERAQIHYMEDGSV EIYSRNAERNTGKYPDVVGSVSRFKKPAVKSFVLDCEIVAYDREKQRILPFQILSTRARK GVILSDIKVAVCTFAFDILYVNGQPLLQEQLKVRREHLYGSFEEVPGVFQFATAITSDDL EEIQKFLDTAVNTSCEGLIIKTLDKDATYEPSKRSNNWLKLKKDYMESIGDSLDLVPIAA FHGRGKRTGVYGSFLLACYDEHNEEYQSICNIGTGFSESQLEERSTSLRNKIIPKPKPYY RFSDTMDPDVWFEPSEVWEVKAADLSISPVHRAANGIVDPNKGISLRFPRLLHVRDDKSP EEATTSEQVAEMYRAQKINHTNNQDEDDDD NT seq 2253 nt NT seq  +upstreamnt  +downstreamnt atgttgttgctgcgagccccgtttctcctgtggctcaaattccctccactgcctccctgc ttcccatctctccccttttcaaacccttcgtcaagaaacctcttccttcgctgctgcagc accggccgtgccgcaatgtcgggccgccgcaccgtcgccgacgttctcatgggcaacgcc cgcgccgcggccgcggccgcagccaaatccaagaagtccgccccatcctccgcccagccc gaacagccttccccttccccttccaagaaaccgaaaaccctagatggcggtggccaaaac cctaaagatcctcccgaggagaagaaccccaccctcgacctgaagaagaagtgctccgac ttcaaccccaagaaagccgctacgtggaaggacggggaacccgttcccttcttgttcctc gcgcgcgcccttgagctaatctcgaacgagtccggaaggatcgccatcacggagattatc tgcaacgtgttcaggaccgtgatcgctaccacgcctggggatcttctcgccaccgtttac ctttcggcgaataggattgcggcgccccatgaaggtattgagcttgggattggggacgcg tcccttgtgaaggcgctcgccgaggcttatgggaggaaggaggagcaagtcaagaagcag ctaaaggaactgggtgacttgggtcttgttgcaaaagcaagccgttcctctcagaaagtg atgttcaagcctcaacccttgacgattgccaaggtttttgatacattccgtgcaattgca aaggagtcgggaaaagatagtcaagacaagaaaagaaatcacataaaaggacttcttgtt gcagcaactgaatgtgaacctcagtatttagttcgtctgcttcagtcaaagatgcgaatt ggtttggcagagaaaactgtcctggtagctctcggacaagcagctatttattctgaaacg aatcaaaatccacggtcacaaactcagtctgatcttgaagaggctgcgaaaattatcaaa caagtttattcggtactcccaatctatgataaaattgttcctgaacttctccgcgttgga gtatggaaacttccagaggcatgcaatttctccctaggtgtgcctgtagggcctatgtta gctaaaccaacaaaggcagtgtctgaaattcttgataagtttcagggaatggaattcact tgcgaatacaaatatgatggtgaacgagcccagatacattatatggaggatggatcagtt gagatatatagtcgtaatgctgaaaggaacactgggaagtacccagatgtggtcggttct gtatcaagattcaaaaaacctgctgtaaaatcatttgtgcttgattgtgaaattgttgct tatgaccgtgagaagcaaaggatcttgcctttccagatattgagcactcgtgctcggaag ggagtgatcttaagtgacataaaagtagctgtttgcacctttgcctttgacattctgtat gtaaatggccaacctctacttcaggagcaactgaaagttcgtcgagagcacctttatggt tcctttgaagaagtacctggagtctttcagtttgcaactgcaataacatcagatgatctc gaggaaatacagaaattccttgacactgctgtcaacaccagttgcgaaggattgattatc aagacattggataaggatgctacatatgagccttcaaagcggtcaaacaattggttgaag ttgaagaaagattatatggaaagcattggtgattcacttgatttggttcctattgctgca ttccatggtcggggaaagcggacaggtgtttatggctcatttcttcttgcttgctacgat gaacataatgaagaatatcaaagcatctgtaacataggtactggtttctctgaatcacag cttgaagaacgatcaacaagtcttcgtaataaaataattccaaagccgaagccatattat cggttttcagatacaatggatccagatgtatggtttgagccatcagaggtttgggaggtt aaagcagcagatttgagcatcagtcctgttcaccgtgctgctaatggtatagtcgatcca aacaagggaatttcacttcgatttcctcgcttactacatgtccgtgatgacaaaagccct gaagaagctacaacatccgagcaggttgctgaaatgtatcgtgctcagaagatcaaccac acaaacaatcaagatgaggatgatgacgattaa

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