Musa acuminata (dessert banana): 103977006
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Entry
103977006 CDS
T03447
Name
(RefSeq) vacuolar protein sorting-associated protein 36 isoform X2
KO
K12190
ESCRT-II complex subunit VPS36
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
103977006
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
103977006
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
103977006
Membrane trafficking [BR:
mus04131
]
Endosome - Lysosome transport
Endosomal sorting complexes required for transport (ESCRT)
ESCRT-II complex
103977006
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
103977006
Exosomal proteins of colorectal cancer cells
103977006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAP30
Vps36_ESCRT-II
Motif
Other DBs
NCBI-GeneID:
103977006
NCBI-ProteinID:
XP_009390663
UniProt:
A0A804I818
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Position
BXJ2-3:complement(2369781..2381553)
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AA seq
436 aa
AA seq
DB search
MAANWLPPVSLTASGRPVFLPGEVERCLLPAVDLESENPGLAPFHSGLLVLTSHRLLWID
EQSAAGFAAPLAAVVHAYPPKKSIRSMFASPRIRVQVSVSPDGRIAEDGVRSEVITVVMR
GKNDPDAFYCRLLEVLRSRQWEAAAVAENRNTDSGIAEPQMAAAARVRMPVVGVSGILRK
EQELWESTDKSLQEAFQDLNALMSKAKDMVQLAEKMRLKLLASSSSSGNADDEEMGSKQE
MQDWLLSVGIVSPVTKESAGALYHQQLSRELADFVKLPLERAGGMIALVDVYCLFNRARG
TALISPDDLLQACTLWEKFDVPVMLRKFDSGVMVIQSKARRDEEVFARIASLAQKPDALR
TGISPSDAALTLGIAPALAKEHLLTAESRGLLCRDVSPDGFRFFINLFTEIDPSDIYMIK
NNGPAHVWSSALSLSG
NT seq
1311 nt
NT seq
+upstream
nt +downstream
nt
atggcggcgaactggctgccgccggtctccctcacagcctccggccgcccagtctttctc
cccggcgaggtcgagcgctgcctcctccccgccgtcgaccttgagagcgagaaccccggc
ctcgctcccttccattccggccttctcgtccttacctcccaccgtctcctctggatcgac
gaacaatccgcggccggctttgccgccccccttgccgccgtcgtccacgcctatcccccc
aagaagtccatccgcagcatgttcgccagccctaggatccgcgtccaggtgtcggtgtcg
cccgatgggaggatcgccgaggacggcgtgcggtcggaggtgatcacggtggtgatgaga
gggaagaacgatcccgacgcgttctattgccggctattggaggtgctgcgatcgaggcag
tgggaggctgcggcggtggcagaaaataggaatactgactcgggaatagcagagcctcag
atggcggctgcggcgagggtgaggatgccggtggttggggtatcgggaattctaaggaaa
gagcaagaattgtgggagagcacggataagagcttgcaggaggcgttccaggaccttaac
gctctcatgagtaaagctaaggatatggtacaactagctgaaaaaatgaggctgaagtta
ttagcaagttcaagttcttcgggcaatgctgatgatgaagagatgggttctaagcaagag
atgcaagattggcttttaagcgttggtattgtatcaccagttacaaaagaatcggctggc
gctttatatcatcaacaactttctcgagagcttgcagattttgttaaattgccacttgaa
agagctggaggaatgattgcattggtagatgtatattgtctgtttaatcgtgctagagga
actgcattgatttcaccggatgatcttcttcaagcttgcaccctatgggagaaatttgat
gtccctgtgatgcttagaaagttcgacagtggtgtaatggttattcaaagtaaggctcga
agggatgaggaggtctttgcgagaattgcctcccttgcacaaaaaccagatgcacttaga
acaggaataagccccagcgatgctgccctgacattaggaattgcccctgctcttgccaag
gagcacctactgactgctgaaagcagaggtcttctgtgcagagatgtcagccctgatggt
ttccgcttttttattaatttgttcacagaaattgatccaagtgatatttatatgattaag
aacaatggacctgctcatgtttggtcctctgctctatcgttgtctgggtag
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