KEGG   Musa acuminata (dessert banana): 103977421
Entry
103977421         CDS       T03447                                 
Name
(RefSeq) DNA-directed RNA polymerase V subunit 1 isoform X1
  KO
K16251  DNA-directed RNA polymerase V subunit 1 [EC:2.7.7.6]
Organism
mus  Musa acuminata (dessert banana)
Pathway
mus03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:mus00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    103977421
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mus03021]
    103977421
Enzymes [BR:mus01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     103977421
Transcription machinery [BR:mus03021]
 Eukaryotic type
  RNA polymerase II system
   RNA polymerase II
    Pol IV and V specific subunits
     103977421
SSDB
Motif
Pfam: RNA_pol_Rpb1_2 DUF3223 RNA_pol_Rpb1_1 RNA_pol_Rpb1_3 RNA_pol_Rpb1_5 Peptidase_M3_N
Other DBs
NCBI-GeneID: 103977421
NCBI-ProteinID: XP_009391189
UniProt: A0A804I8T3
LinkDB
Position
BXJ2-3:4088649..4114632
AA seq 1738 aa
MEDQVSSPLVLDGSIRSIKFSIATAEEIRTYSISDCPISHPSQLANPFLGLPLESGGCET
CGTAEIGNCEGHFGYIELPIPVYHPSHVSELRDLLSLVCLKCLRMKKVKYSVGKGKISSM
PCLYCLDLPSISIKEVKTADGATCLELRVSSRSRLQDGFWSFLDRFGYHYAGTFRRPLLP
SEALKILEKLPEETQKKLAGKGYFLQNGFIMERLPVPPNCLCVPEISDGKCVMSSDISKS
LLKKILGKIELIKRSRSGSPSFESYEVETNDLQSSIALYMNLRGTTKAPRDITRRFAFGN
ETNEYLTKQWLDKIRTLFIRKGSGFSSRSVISGDPYIGINVVGLPSEIAKRITFEERVTE
HNITRLQNVVDSRLCITYKDGSSTYAISVGSKGHTNLKIGQVINRQILDGDIVFINRPPS
THKHSLQAFYVYIHDDHTVKINPLICAPLGADFDGDCVHIFYPQSLSAKAEVLELFSVEK
QLLSSHSGSLNLQLVQDASLALKLIFKSGFIKKEVAQQLGMYVSSMLPPPAIVKATKCGP
CWTILQVLQNVFPAFLDCSGERYFIRESEILELDTDQDVVQSLLTDIMTHIYRMKGPMEV
LNFFNYIQPLLMEMLFMEGFSICLKDFILSKAVVSEIQGSIQKNSCILNQLRSRRDERAE
LQVQNHLRSMKDPIVKFILNSSALGNLIDSKSDSSMVKVVEQLGFLGLQLFDQGKYYSRA
LVDDCFLNFVSKHSAGEVDHPSEAYGLVKNSFFHGLNPYEMLVHAISSREVIVRSSRGLT
EPGTLFKNLMAILRDVVICYDGSVRNVCTGSLVQLEYVDDEGVNSVNTPPAGDPVGVLAA
TAISNLAYKAVLDSSQSNNSSWELMKEILLCKVSYKNDVSDRRVILYLNDCCCQKRFCKE
NAAFAVLNCLKRVTLKDCAHEFLIEYQKQIGVCDSSVTTSGLVGHIHLDKMQLKLLNINP
DDILHKCQAVIFSYGKKKGQLSHFFRRIFLSTCECCSIKQPSDGNLCHLPCLQFSYADAN
ASQNNISLERAIHVMSETICPILLDTIVKGDPRVHEVKIVWIGPDATSWVGSSCKTLKGD
LGLEVVLGQDAVRQSGDAWRTVLDACLPVMHLIDTGRSIPYGIQQIQEVLGISCAFDQSV
QRLSKSIKMVSKGVMKEHLLLVANSMTCTGKLIGFNTGGYKALFRSFKVEVPFTAATLFT
PMKCFERAAEKCQVDSLASVVSSCSWGKNVAIGTGAPFQILWDKKQMAMNKDIGKGVYDF
LELLRETSSGGATGRYLADVDELAEENGICLSPDLDGCMTFDDSDDVEYNFQKRIGLVNG
KSGESSWEVDPVSVKSGNWEGWGDKESTHVHNCESPATKHNVWSSWDSIQVKQKTVESEN
LAGDTVPGEDMDAQKHSGTADESVAWGKWKADGNSTAWDRLSHRNCWNEASKTKVDLKEG
SPVWNRTASSPKSKHNQDSLYSTPGTWSSQSSGKPWGQDNANNTKRNIAQDGWRCAESPV
TNIWDSTSTRNANVSDSQWSGNPSKNLDIQWDGNDSNKDLGSQWCGNVTSTSNTSEGRNQ
SWNSRGWGSANPPGRKNQKTFSARFPGKSASQKGWNSNRALASGRRLESLTAEEEKILAE
VEPVMQTIKRILHDSSDGNRLSADDQKFILENVFKYHPDKQSKVSDQVDYIMVDKNMSFQ
DSRCFYVVSSDGTSADFSYLKCMEGYVKQTFSEHGESFCKKYFKRRRSGPADDKNQQQ
NT seq 5217 nt   +upstreamnt  +downstreamnt
atggaagatcaagtttcctctccacttgtcttagatggatctattcgtagcatcaaattt
agcatagcaactgctgaggaaattaggacatactccataagtgattgtcccatttcacac
ccatcccagttagcaaatccttttcttggcttgccattggaatctggtggatgtgaaacc
tgtgggacagctgaaattggaaattgtgaaggtcattttggttacattgagttgccaata
cctgtatatcatccttctcatgtcagtgaattgagagatcttttaagtttggtatgtcta
aagtgcttgaggatgaagaaggttaaatacagtgtgggcaaggggaaaatctcaagcatg
ccatgtctctattgtctggatcttccttctatatctattaaagaagtgaagacagcagat
ggtgctacttgcttggaattaagagtatcatctagatcgagattacaagatggcttctgg
agtttcttagatagatttggttatcattatgctggaacattccgtcgcccattgctgccc
tccgaggctcttaaaattttggagaagcttccagaagaaacccaaaaaaagttggctggg
aagggatacttccttcagaacgggttcattatggaacggctacctgttcctccgaattgc
ttgtgtgtgccagaaatttcagatgggaaatgtgtcatgtcctccgatatttcaaagtcc
cttcttaagaaaattcttggcaagattgagctgatcaaaaggtcaaggtctggttctcca
agttttgaatcttatgaagttgagacaaatgatctgcaatcatcaattgcactgtatatg
aatctcagaggtaccacaaaggcacctcgtgacatcacaagaagatttgcatttggcaat
gaaactaatgagtatttgacaaagcagtggcttgataagattagaactttatttatcaga
aagggttctgggttttcctctcgttctgttattagtggagacccttatattggaattaat
gtagtggggttaccatcagaaatagcaaagagaattacatttgaagaacgtgtgactgag
cataatataactcgtttgcagaatgtagttgatagccgtttgtgtattacatacaaagat
ggttcctccacttatgccatttctgtagggtcaaaggggcatacaaatcttaaaattggc
caggttataaatcgtcaaattttagatggggatatagtttttattaacaggccccctagt
actcataagcactcattacaagcattctatgtttatattcatgatgatcatactgttaag
atcaatcctcttatatgtgctccacttggagcagattttgatggtgactgtgttcatatt
ttctatccacaatccctatctgcgaaagctgaggttctagaattatttagtgtggaaaaa
cagctgcttagttcccattctgggagcttgaacttgcagcttgttcaggatgcttcattg
gccttgaagcttatattcaaatctggtttcataaagaaggaagtagcacaacaattgggg
atgtatgtctcatcaatgctaccaccacctgcaatagtcaaggctactaaatgtggtcct
tgttggacaattcttcaagttctccagaatgtgttccctgcttttttggactgttctggc
gaacgatattttatacgtgagagtgaaattttggagttagacactgatcaagatgtagtg
cagtctttgctgacagatatcatgactcatatttaccgcatgaagggcccaatggaggtt
cttaatttcttcaactatatacagcctttactaatggagatgctgtttatggaaggcttt
agtatttgtttgaaagattttattttatcaaaggctgttgttagtgaaattcaaggaagc
atccagaaaaattcatgcatactcaatcaattgagatcaagacgtgatgaacgtgcggaa
ttgcaagttcagaaccatcttagaagcatgaaggatccaatagtgaaatttatcctgaat
tcttctgcactgggtaacttaatcgactcaaaaagtgattcatcaatggttaaagtggtt
gaacagcttggatttttaggtcttcaactttttgatcaaggaaaatattactcaagggct
ttggttgatgactgctttttaaactttgtaagcaagcattccgctggtgaagttgatcat
ccatcagaagcatatggactggtgaagaactctttttttcatggtctaaatccatatgaa
atgttagtccatgcgatatcatccagagaagtgatagttcgttcgtctagaggactcaca
gaacctggaactttgtttaaaaatttgatggcaattcttcgagatgttgttatctgctat
gatggaagtgtcagaaatgtgtgtactggttcacttgtgcagcttgagtatgtggatgat
gaaggagttaattccgtaaatactcctcccgctggtgatcctgtaggtgtgttggctgca
actgcaatatcaaaccttgcatataaggcagttcttgattcatctcaaagtaacaattca
tcatgggaactcatgaaagaaattcttctttgtaaggtcagttacaaaaatgatgtttct
gaccgccgagtgattttgtacttgaatgattgctgctgccagaaaagattttgcaaggaa
aatgcagcattcgcagttttgaactgcttaaaaagagtcactttgaaggactgtgctcat
gagttcttaattgaatatcagaaacaaataggtgtgtgtgacagttcagtgacaacatca
ggacttgttggtcatatccatcttgacaagatgcaattgaagttgttgaacataaatcct
gatgatattcttcacaaatgtcaagctgttatttttagctatggaaagaagaaaggacag
ctttcacatttctttaggagaatttttctgtctacttgcgaatgttgcagcatcaagcag
ccaagtgatgggaacttgtgtcatctcccatgcttgcagttctcttatgctgatgctaat
gccagccaaaataacatatctcttgaaagagcaatacatgtgatgtctgagaccatctgc
ccaattctgttggatacaattgttaaaggtgatcctagagttcacgaggtgaaaattgtt
tggattgggcctgatgcaacttcttgggttggaagttcatgtaaaaccctaaagggtgac
ttaggccttgaagttgttcttggacaagacgcagttcggcaaagtggtgatgcctggcga
actgttttagatgcttgcttacctgtgatgcaccttatagatacaggacgatctattcct
tatggtatccaacaaattcaagaggttcttggcatttcttgtgcttttgaccaatctgtt
cagcgattgtcaaaatcaatcaaaatggtttctaaaggtgtgatgaaggaacaccttctg
cttgttgcaaacagcatgacttgcactggaaagcttatcggtttcaacactggtggttat
aaggcgctctttcgttctttcaaagttgaagtaccatttactgcagccactttatttaca
ccaatgaaatgctttgaaagagctgctgagaagtgtcaggttgattcattagccagtgtg
gtttcatcctgttcatggggcaaaaatgtggctattgggactggtgcaccattccagatt
ctttgggataagaaacagatggcaatgaacaaagatattggaaaaggagtctatgacttt
ctggagttattaagggagacatctagtggaggagcaactggcagatatctagcagatgtt
gatgaactggcagaagaaaatggaatttgtttatcacctgacctcgatggatgtatgact
tttgatgatagtgatgatgttgagtacaactttcagaaaaggattggcctggtaaatgga
aaatctggcgagtctagctgggaagtggatccagtttcggtcaagtcaggtaactgggag
ggatggggagataaagaatcaactcatgtgcacaactgtgaatcgccagcaaccaaacat
aatgtttggtctagttgggattccatccaagtgaaacaaaagactgttgaatctgagaat
ctggcgggtgatactgtacctggtgaagatatggatgcacagaaacattctggtacagca
gatgagtctgttgcatgggggaaatggaaggcagatgggaactcaactgcctgggacaga
ttgtctcacaggaattgttggaatgaggcaagcaagaccaaggtggatttgaaagaagga
tcaccagtttggaatagaactgcttcaagcccaaaaagcaaacataatcaggattcattg
tattcaacgccagggacttggagcagccagagctccggaaaaccttggggtcaggataat
gctaataacactaaaagaaatattgcacaagatggctggagatgtgctgaatcaccagta
acaaatatttgggattccacttcaaccagaaatgctaatgtttcagacagccagtggagt
ggcaatccttccaagaatttggacattcagtgggatggaaatgactctaacaaagacttg
ggcagccagtggtgtggaaatgtcacttccacatcaaacacctccgaaggtagaaatcaa
tcatggaattctcgtggttggggttctgcaaatcctcctggtaggaaaaaccaaaagacg
ttttctgcaagatttccaggaaagtcagcttctcaaaaaggttggaattcaaatagggcc
ttggcttcagggcgacgactagaatctcttacagctgaggaggaaaagattcttgctgaa
gttgagccagttatgcagacaataaagaggattctgcatgattccagtgatggcaatcga
ctttctgctgatgatcaaaagttcatcttggagaatgttttcaagtaccaccctgataag
caatcaaaggtgtctgatcaagttgactacatcatggttgacaagaacatgagcttccaa
gactcgaggtgcttttatgtggtatcatcggatggcacaagtgcagacttctcctatctc
aaatgcatggagggttatgtcaagcaaactttctcagagcatggggagtccttttgtaaa
aagtattttaagaggcgtcgttccgggcctgccgatgataaaaatcagcagcagtag

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