Musa acuminata (dessert banana): 103977826
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Entry
103977826 CDS
T03447
Name
(RefSeq) DNA polymerase lambda isoform X1
KO
K03512
DNA polymerase lambda [EC:
2.7.7.7
4.2.99.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03410
Base excision repair
mus03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
103977826
03450 Non-homologous end-joining
103977826
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mus03400
]
103977826
Enzymes [BR:
mus01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
103977826
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
Other BER factors
103977826
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
X-family DNA polymerases
103977826
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_B_palm
DNA_pol_lambd_f
DNA_pol_B_thumb
HHH_8
BRCT
NTP_transf_2
HHH_5
Cdd1
PTCB-BRCT
BRCT_2
Motif
Other DBs
NCBI-GeneID:
103977826
NCBI-ProteinID:
XP_009391734
UniProt:
A0A804IAF7
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All DBs
Position
BXJ2-3:7816311..7844341
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AA seq
552 aa
AA seq
DB search
MAPRRGSQNRQRSPTPDPDGMFQGMVVFLVPKGVQPRRLQVWKQKLTQMGAVVDDNLSKR
VTHIFAMNSSTLLQQVNLELLHRHEGILLHYQWLENCLRLGEKIAEDPYVLKFQGVNRSD
KHSGKISPEPSEARYPDDELSSHKRIKVSFKVVEGSSMEENRAKKADSTRSENQHSGVHG
QVEGPSTSDDSLQDTKLGTDASGAPTNKADVSQSQSPYNPPDLNRNITEIFGKLINIYRA
LGDERRSFSYYKAIPIIEKLPFRIESVDQVKNLPTIGKSLQDHIHEIVTTGKLSKLEHFE
NDDKVRTVNLFGEIWGVGPATALKLYEKGHRNLDDLKHDDSLTAAQKIGLKYFDDIKTRI
PRHEVKDMEMLLQNAGQEVLPGVIVVCGGSYRRGKASCGDLDIVITHPDGESHKGFLPRY
VQYLKDINFLREDLVFSTHSTEGTDSGVDTYFGLCTYPGRELRHRIDLKVYPKDRYAFGL
IAWTGNDVLNRRLRLLAESKGYRLDDTGLYLATQGSPGKRGTKSSTRVSCYTEKEVFDVL
GFPWPEPHERNM
NT seq
1659 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagaaggggctcccagaaccggcagcggtctcctaccccggaccccgatggc
atgttccagggcatggtcgtcttcttggtccccaagggcgtccaaccccgaaggcttcaa
gtatggaagcagaagctaacccaaatgggagctgtggttgatgataacctctcaaagaga
gttactcatatttttgcaatgaactctagtacgcttctacagcaagtgaacctggaactc
ttgcatcgacatgaaggaattttacttcattatcaatggttagagaactgtctaagatta
ggagaaaaaatagctgaagatccatatgtgctgaagtttcaaggtgttaatagatcagat
aagcactctggcaagatatctcctgaaccatctgaagctagatatcctgatgatgagctg
tcaagccacaaaaggatcaaagtttcctttaaggttgtggaaggatcaagcatggaagaa
aatagagccaagaaagcagactcaactagatcagaaaatcaacactctggcgttcatggt
caagttgagggtccatcaacgagcgacgacagcttacaagataccaaacttgggactgat
gcttctggtgcaccaacaaacaaggctgatgtgtctcagtcacaatctccatacaaccca
ccagatctgaacaggaacattactgaaatatttggaaagctgatcaacatttacagagca
ttaggagatgaaaggaggtcattcagctactacaaggccattcctattattgagaagttg
ccttttagaattgaaagtgttgatcaggtcaaaaatcttcctacaattgggaagtcattg
caggaccatattcatgaaatagtgactactggaaagttatctaaattggagcactttgag
aatgatgacaaggttcggacagtaaacctttttggtgaaatttggggtgttggtcctgcc
actgctcttaaattatatgaaaaaggtcaccgtaaccttgatgatttaaaacatgatgac
tcattgacagctgctcagaagataggtctgaagtacttcgatgatataaagacaagaatt
ccacgacatgaggttaaagatatggagatgcttttacaaaatgctggtcaggaggttttg
cctggggtaatcgttgtatgtggaggatcatatagacgtggaaaagcttcttgtggggac
ctggacattgtaattactcatcctgatggggaaagtcataaaggattcttacccaggtat
gttcaatatttgaaggacattaactttttaagagaagacttggtatttagcactcatagc
actgagggtactgattcaggggtagacacatattttggtctctgcacatatcctggtaga
gaattgcgacatcggattgatttgaaggtgtatccaaaggatcgatatgcttttggacta
atagcatggactggaaatgatgtactaaataggcggttgcggttgttagcagaatccaag
ggatacaggctcgacgacacgggactgtacttggccacccagggttctcctggaaagaga
gggaccaaatccagcaccagagtaagctgttacacggagaaggaggtgtttgatgtactt
gggttcccttggccggaacctcatgagaggaatatgtga
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