Musa acuminata (dessert banana): 103978476
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Entry
103978476 CDS
T03447
Name
(RefSeq) small RNA degrading nuclease 5 isoform X3
KO
K14570
RNA exonuclease [EC:3.1.-.-]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03008
Ribosome biogenesis in eukaryotes
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
103978476
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
103978476
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
Pre-60S particles
RNases
103978476
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Motif
Pfam:
RNase_T
NET2A_C
PIN_8
HolB_lid
Motif
Other DBs
NCBI-GeneID:
103978476
NCBI-ProteinID:
XP_009392545
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All DBs
Position
BXJ2-3:33477670..33490994
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AA seq
564 aa
AA seq
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MGSSSSPKAPESLNRENHDDGSAASFFDIYGPDGKADVIYKTPAADSTLNLQDIQGLVTW
VIGDGLMPSWVFVKNKPLIQKVILLYIPGLDAALYMENSGLLTGLRDSCGAPKPALALSC
VSDELQTIDALLTCKVKRKRDEVDLKPKTSGQTFEQGELFALENLRELPFPIHYYTLSRK
ELEDNGYILNQPGVIATLPSPSGSPLHEILALDCEMCVTAEGFELTRVTLVNVAGEVVLD
KLVKPSNSILDYNTRYSGITREMLNDVTTTIKDVQEEFLKLVHKETILVGHSLENDLLAL
KISHDLVIDTAILYKHSRGACYKIALRVLSSRFLSRQIQASGNGHDSIEDARAAMELALL
KIRHGPDFGLPPKFTRSKLVSALHQSGKSCSLVDDVSILKRYSDESCNSIPVFSDSEALS
RAIKEVKNEKVSFIWTRFSGLFSYFKKQAQDVERLRHRIAEVISSLTCKRKKARTTIKHG
AVCSELKDILTGIDVKIQKLYNALPNNALLIVSTGHGDTAIVQRLRKMLTDGCDENINRE
EVVRALEELQARAEVALCFVCVKH
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgggctcgtcctcctcccccaaagcccccgagagccttaaccgagagaaccacgatgat
ggctccgccgcctctttcttcgacatctatggacctgacggaaaggctgatgttatatat
aaaacccctgcagctgattcaactctaaatcttcaggatattcaagggcttgtaacctgg
gtcattggtgatggtctcatgccatcctgggtttttgtcaagaacaagccacttatacag
aaagtcatactactctatattccaggcctggatgcagctttgtacatggaaaactctggc
ctacttactggtctaagggacagttgtggtgctcccaagccagcattggctttaagttgt
gtttcagatgaattgcaaacaattgatgcgcttctaacatgcaaagtgaaaagaaagcgt
gatgaggttgatttaaaacccaagacatctggtcaaactttcgaacaaggagaattattt
gctctggaaaatttaagggaactaccttttcctatccactattataccctttccagaaag
gaacttgaggataatggatatatcttgaatcagccaggtgtgatcgccactcttccttct
ccttcagggtccccattgcatgaaattcttgcacttgactgtgagatgtgcgtgactgca
gaagggtttgaactcacaagagttacactggtaaatgttgcaggagaggtggtgctcgac
aaactagtcaaaccttccaacagcattctcgactacaatactaggtacagtggaattact
cgtgagatgctaaatgatgtgacaaccacaatcaaggacgttcaggaagagttccttaag
cttgtgcacaaagaaacaattcttgttggccattctcttgagaatgaccttctagcatta
aagatatctcatgatttggtaatcgatacggctattttgtacaagcattctcgtggtgct
tgctacaagatagctctgcgagttctatctagtagatttctttcgcgacagattcaggca
tcaggaaatggacatgacagtatcgaagatgcaagagctgctatggaattagcacttttg
aagattagacatggacctgattttggcttaccaccaaaattcactcgaagcaagctggtt
tctgctttgcatcagagtgggaaaagttgttctctcgttgatgatgtatcgattctgaaa
agatattctgatgaatcatgcaattcaattccagtattttcagattctgaggcgctttcc
agagctataaaagaggtaaaaaatgaaaaagtaagctttatttggacccgtttttctgga
ttgttctcttatttcaagaagcaagctcaagatgtagagaggttgagacatcgaattgcg
gaggtgatatcgtccctgacatgtaagagaaaaaaagccaggacaaccataaagcatggt
gcagtatgctcagaattgaaggatatcctaactgggatagatgttaaaattcaaaagctg
tacaatgcattacctaataatgctttattaatagtttctaccggtcatggagatacagct
attgttcagagattaaggaaaatgctcaccgatggttgtgacgaaaatattaatcgtgaa
gaagttgtgcgagccttggaagaactccaagcccgagcggaagtggcactttgctttgtc
tgtgtcaaacattga
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