Musa acuminata (dessert banana): 103978643
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Entry
103978643 CDS
T03447
Name
(RefSeq) ruBisCO large subunit-binding protein subunit beta, chloroplastic
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103978643
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103978643
03110 Chaperones and folding catalysts [BR:
mus03110
]
103978643
03029 Mitochondrial biogenesis [BR:
mus03029
]
103978643
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mus04147
]
103978643
Enzymes [BR:
mus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
103978643
Messenger RNA biogenesis [BR:
mus03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
103978643
Chaperones and folding catalysts [BR:
mus03110
]
Heat shock proteins
HSP60 / Chaperonin
103978643
Mitochondrial biogenesis [BR:
mus03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
103978643
Exosome [BR:
mus04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
103978643
Exosomal proteins of other body fluids (saliva and urine)
103978643
Exosomal proteins of breast cancer cells
103978643
Exosomal proteins of colorectal cancer cells
103978643
Exosomal proteins of bladder cancer cells
103978643
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-GeneID:
103978643
NCBI-ProteinID:
XP_009392770
UniProt:
A0A804IHG1
LinkDB
All DBs
Position
BXJ2-3:complement(41673083..41679223)
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AA seq
612 aa
AA seq
DB search
MAATFYAMSTVGAIASPSNVRPNKKLLASKQKFSQFSSFSSISPIAISGRGQSLCYLRRG
NSKINAMAKELYFNKDGSAIKKLQTGVNKLADLVGVTLGPKGRNVVLESKYGSPKIVNDG
VTVAKEVELEDPVENIGAKLVRQAAAKTNDLAGDGTTTSVVLAQGLIAEGVKVVAAGANP
VQITRGIEKTAKALVTELEKMSKEVEDSELADVAAVSAGNNYEIGNMIAEAMNKVGRKGV
VTLEEGKSAENNLYVVEGMQFDRGYISPYFVTDSEKMTVEYENCKLLLVDKKITNARDLI
NVLEDAIRGGYPVVIIAEDIEQEALATLVVNKLRGSLKIAALKAPGFGDRKSQYLDDIAI
LTGATVIRDEVGLSLDKAGKEVLGTAAKVVLTKDSTTIVGDGSTQEEVTKRVAQIKNLIE
AAEQEYEKEKLNERIAKLSGGVAVIQVGAQTETELKEKKLRVEDALNATKAAVEEGIVVG
GGCALLRLASKVDAIKETLDNDEQKVGADIVKRALSYPLKLIAKNAGVNGSVVMEKVLAN
DNFKYGYNAATGKYEDLMAAGIIDPTKVVRCCLEHAASVAKTFLTSDVVVVDIKEPEPVP
AGNPMDNSGYGY
NT seq
1839 nt
NT seq
+upstream
nt +downstream
nt
atggctgctactttctatgcaatgtctactgttggtgctattgcttctcctagcaatgtc
agaccaaataagaagctcttggcttctaaacaaaagttctcccagttttcttctttttct
tctatatcacctattgcaatcagcggcaggggacagagcttgtgttatctgagaagagga
aactctaagattaatgcaatggctaaggaattatacttcaacaaggatggatcagctatt
aaaaagctacaaactggtgtcaacaagcttgcagaccttgttggggttacccttggtccg
aagggcaggaatgttgtcttggaaagcaagtatggatcacctaagattgtaaatgatggg
gtgacagtagcaaaagaggttgagctagaggatcctgttgagaacattggtgccaagcta
gtaagacaagcggctgctaagaccaatgatttggctggtgatgggacaactacgtcagtt
gttcttgctcaagggttgattgcggaaggtgttaaggtggttgcagccggtgctaaccct
gttcagattactcgtggcattgaaaaaactgccaaagcactagttactgaacttgagaag
atgtctaaggaggtagaagacagtgaacttgcggatgttgcagctgttagtgctggtaac
aactatgagatagggaacatgattgctgaagcaatgaacaaggttgggaggaagggggtg
gttacccttgaagaagggaaaagtgccgagaacaacctatacgttgttgaggggatgcag
tttgatcgtggttatatttccccttactttgtgacagacagtgaaaaaatgactgttgaa
tatgagaattgcaagttgcttctagttgacaagaaaatcaccaatgctagagatcttatc
aatgttttggaagatgccataagagggggatacccagtagtcataattgcagaagatatt
gaacaggaagcccttgcaactcttgttgtgaataaattaagagggtcactgaagattgct
gcactaaaagcccctggatttggggaccgcaaaagtcagtaccttgacgatattgcgata
ttgactggagctactgtaattagagatgaagttggcctttcactggataaagctggcaaa
gaggtcttgggtactgctgccaaggttgtactcaccaaagattcaaccacaatagttgga
gatgggagtacgcaggaggaagtaactaaaagagttgcacagataaagaatctgattgag
gctgcggagcaagaatatgagaaggaaaagcttaatgagcgaatagcaaagctgtctggt
ggtgttgccgtcattcaggttggagcacaaacagaaacagaactaaaagagaagaagttg
agagttgaagatgctctgaatgctaccaaggctgctgttgaggaaggtattgttgttggt
ggtggctgtgctcttctgaggcttgcatcaaaagtcgatgccatcaaggaaacacttgac
aatgacgagcaaaaggttggtgcggacatagtcaagagggccttgagctacccactgaag
ctgattgctaaaaatgctggcgttaatggaagtgtggtcatggagaaggtgctggccaat
gataacttcaagtatggttataatgctgctactgggaaatatgaggatttgatggctgct
ggtataattgaccctactaaggtggtgaggtgttgtttggagcatgccgcatcagtggca
aagactttcctcacgtcagatgtcgtggttgttgacattaaggagcctgagcctgtgcct
gccggaaatccaatggacaactcaggttacggatactag
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