Musa acuminata (dessert banana): 103978980
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Entry
103978980 CDS
T03447
Name
(RefSeq) transport inhibitor response 1-like protein Os05g0150500 isoform X1
KO
K14485
transport inhibitor response 1
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus04075
Plant hormone signal transduction
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09130 Environmental Information Processing
09132 Signal transduction
04075 Plant hormone signal transduction
103978980
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103978980
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
SCF complex
Target recognizing subunit (F-box)
103978980
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Gene cluster
GFIT
Motif
Pfam:
Transp_inhibit
F-box_5
LRR_At5g56370
DUF7885
F-box-like
F-box
LRR_At1g61320_AtMIF1
Motif
Other DBs
NCBI-GeneID:
103978980
NCBI-ProteinID:
XP_009393237
UniProt:
A0A804IG16
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Position
BXJ2-3:39037984..39044013
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AA seq
582 aa
AA seq
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MVGGFRWAAMFPDEVWEHVFSFLPADADRNAAALVCRAWYRIERRSRWRVFVGNCYAVEP
AAAVRRFPEVRAAAIKGKPHFADFNLVPSDWGGGAEAWVEAMAEGWPHLEELRLKRMVVS
DDCLELIARCFKNFKVLSLVSCEGFSTAGLAAIAANCRNLRELDLHENEVEDNCLHWMSH
FPESFASLVTLNIACLEGEVNVSVLERLIGRCPNLKTLRLNHSVPLERLVGLLHRVPQLV
DLGTGKFAAQHHPELFSKLESAIAGCKNLKSLSGFWEAGPTYLPAIYSVCEGLTSLNLSY
ATIQGPELIKLISWCKNLQRLWVMDLIEDDGLIAVAASCKLLQELRVFPSDPYGAAQPIS
LTEHGLVAISAGCPMLHSVLYFCRQMTNAALLTVAKNCPNFTCFRLCIMEPHTPDYITRQ
PLDAGFSAIVESCNHLRRLSLSGLLTDLVFKSIGASANCLEMLSVAFAGDGDAGLHYILS
GCKNLRKLEIRDCPFGDKPLLDNAAKLETMRSLWMSSCSVTLGACRQLARKMPLLNVEVI
NERKRGLPLELQPDNCPVEKLYIYRTVAGPRSDTPSCVWILR
NT seq
1749 nt
NT seq
+upstream
nt +downstream
nt
atggtaggggggttcagatgggcggcgatgttcccggatgaggtgtgggagcacgtgttc
tcgttcctcccggcggacgccgaccggaacgcagcggcgctcgtgtgccgcgcgtggtac
cggatcgagcggcggtcgcggtggcgggttttcgttgggaactgctatgcggtggagccg
gccgcggcggtccggcgattcccggaggtgagggcggccgcgatcaaggggaagccccac
ttcgccgatttcaacctggtgcccagcgactggggcggcggggccgaggcgtgggtcgag
gcgatggcggagggttggccgcacctggaggagctccgcctcaaaaggatggtggtctct
gacgactgccttgagctcatcgcccggtgtttcaagaacttcaaggtgctctctctcgtc
tcctgcgagggtttcagcacggccggactcgccgccatcgccgccaactgcaggaatctg
agggagctagacctacatgaaaatgaagtggaggataattgtctacattggatgagccac
tttccagagtcttttgcttctttagtaaccctgaacattgcatgcttggaaggtgaggtg
aatgtttctgttcttgagcgcctcattggcagatgtccgaatctcaagaccctcagactc
aaccattctgtgcctctagaaaggcttgtcggcctcctacacagggtgccacagctggtg
gaccttggaactggcaagtttgctgcacaacatcatccagagcttttctccaagctcgag
tctgccattgctggctgtaaaaatttgaagagcctctctggtttctgggaagctggaccg
acatacctacctgcaatctactcagtttgtgagggtcttacatcactgaatctgagctat
gctacgatacaaggcccggagctcatcaagttaatcagctggtgcaaaaatctgcaacga
ctatgggtaatggatttaattgaggacgatggccttattgctgtggcagcatcttgcaag
ctccttcaagaactacgggtattcccttctgatccatacggtgccgcacagcctatctct
cttaccgaacatggtctggtcgccatctctgctggttgcccaatgcttcactctgttctc
tacttttgccggcaaatgactaacgcagctctccttactgttgctaaaaactgccctaat
ttcacgtgcttccgcctctgcattatggagcctcacacccccgattatatcactcgacaa
cctctagatgctggcttcagtgctatcgttgaatcctgcaaccacctccggcgcctctcc
ctatctggtcttctcactgaccttgtctttaaatctatcggggcctcggcaaattgtctt
gagatgctgtcagttgcttttgctggtgatggtgatgctggtcttcattacattctctct
ggttgcaagaacttacggaagctggaaatcagggactgcccgtttggggacaaacctttg
ttggataatgctgcgaaactggagacaatgcgatccctttggatgtcatcatgctctgtg
accctgggagcctgcagacagcttgcccggaagatgccactacttaatgtggaggtcatc
aacgagagaaaaagagggctgccgttggagttacagcctgataattgccctgtcgagaag
ctctacatttatcgaacagttgctggtccaagatctgacaccccatcatgtgtttggatt
ttaaggtga
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