Musa acuminata (dessert banana): 103978989
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Entry
103978989 CDS
T03447
Name
(RefSeq) LEC14B homolog
KO
K11801
DDB1- and CUL4-associated factor 11
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mus04121
]
103978989
Ubiquitin system [BR:
mus04121
]
Ubiquitin ligases (E3)
Multi subunit type E3
Cul4 complex
Target recognizing subunit (DCAF)
103978989
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
WD40_Prp19
WD40
WD40_CDC20-Fz
Beta-prop_EML_2
WD40_WDHD1_1st
WDR55
EIF3I
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
WD40_MABP1-WDR62_1st
Beta-prop_EML
Beta-prop_RIG_2nd
Beta-prop_TEP1_C
Beta-prop_WDR75_1st
Beta-prop_EIPR1
WDR90_beta-prop_4th
NBCH_WD40
Beta-prop_IFT122_1st
Beta-prop_WDR90_POC16_2nd
Beta-prop_SCAP
WDR54
PROPPIN
WD40_like
PQQ
Motif
Other DBs
NCBI-GeneID:
103978989
NCBI-ProteinID:
XP_009393252
UniProt:
A0A804IG03
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Position
BXJ2-3:complement(38965494..38971017)
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AA seq
465 aa
AA seq
DB search
MRRWRLNRSRASSSTLVPVDATFTIDDEISQLTKLQSGPCTSNLKALRSCRRMPIPTTTM
LLAREANYSGQGRFSSADCSHVLGRYLPVNSPSQIDRMNSEAYVSQFSIDGSLLVAGFQG
SRIRIYNVDNGWKVQKDINAQSLRWTITDTALSPDQRHLVYSSLTPLVHIVNVRTGMTDS
QANITEIHEHLDFSVDGDRDSFNIFSIKFSTDGRELVAGGSDDSIYVYDLEANKLAMRII
AHTDDVNTVSFADETGHVMFSGSDDNLCKVWDRRCIAATGNPAGFLEGHLEGITFIDSRG
DGHYFISNSKDQTTKLWDIRRMSSTTKSRTPRTYYDWDYRWMDYPAEARNQKHPCDRSVA
TYKGHSVLRTLIRCYFSPTHSTGQKYIYTGSFDKCVYIYDVVTGAIVAKLAWHNDAIRDC
SWHPYYPVLVSSSWDHAVTRWEFPGSPADSAVKRKTSQRRHEGHP
NT seq
1398 nt
NT seq
+upstream
nt +downstream
nt
atgcgacgttggaggctgaatcggagcagagcttcttcttccacgctagtgcctgttgat
gcgactttcacgattgatgatgagatatctcaacttacgaagctccaatcgggaccctgt
acaagtaaccttaaggctctaaggagctgccggagaatgcctatccccacaactacaatg
ttattggcaagggaagctaattattctggacagggaaggttctcgtcagctgattgctca
catgttcttggccggtacctgcctgtgaattctccaagtcaaatagacaggatgaacagt
gaagcatatgtgtcgcaattctccattgatggttcacttcttgttgcaggatttcagggg
agccgtattagaatttacaatgttgacaatggatggaaagtacagaaagatataaatgct
cagagtttgagatggacaattacagatacagctctttcacctgaccaacggcatcttgtt
tattctagtctcacaccacttgttcatattgttaatgtgcggaccgggatgacagactca
caagctaacattacggaaattcatgaacatttggatttttctgttgatggcgacagagac
tccttcaatatattttccataaaattttcaaccgatggtcgagagcttgttgctggaggc
agtgatgattcaatatatgtgtatgacctggaggcaaacaagttggcaatgcgcattata
gctcacaccgatgatgtaaatacagtttcatttgctgatgaaactggccatgtcatgttc
tccggtagtgatgataatctctgcaaggtttgggacagacgatgcattgcagcaacagga
aatccagcaggttttctcgaaggtcatctagaaggcattacatttatagatagccgtggg
gatggccattacttcatttcaaatagtaaagaccagactaccaaactttgggacattagg
agaatgtcctccactactaaatcccgaactccgagaacttattatgactgggactataga
tggatggactacccagctgaagcaaggaatcagaagcacccatgcgatcggtctgtagct
acatataaagggcattcagtcttgcgcactctgatacgctgttacttctcccctacacac
agcacgggtcagaagtacatctatacaggatccttcgacaagtgtgtttatatctatgat
gtggtaactggagcaatcgttgcaaaactcgcctggcacaacgatgccattagagattgt
agctggcacccctattacccagtgcttgtcagttcttcctgggaccatgctgtcaccagg
tgggagttcccaggcagtcctgccgattccgccgtgaagaggaagacaagccagaggaga
catgaagggcatccgtga
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