Musa acuminata (dessert banana): 103979318 Help Entry 103979318         CDS       T03447                                  Name (RefSeq) E3 ubiquitin-protein ligase COP1   KO K10143   E3 ubiquitin-protein ligase RFWD2 [EC:2.3.2.27] Organism mus  Musa acuminata (dessert banana) Pathway mus04120   Ubiquitin mediated proteolysis mus04712   Circadian rhythm - plant Brite KEGG Orthology (KO) [BR:mus00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    04120 Ubiquitin mediated proteolysis     103979318  09150 Organismal Systems   09159 Environmental adaptation    04712 Circadian rhythm - plant     103979318  09180 Brite Hierarchies   09182 Protein families: genetic information processing    04121 Ubiquitin system [BR:mus04121]     103979318 Enzymes [BR:mus01000]  2. Transferases   2.3  Acyltransferases    2.3.2  Aminoacyltransferases     2.3.2.27  RING-type E3 ubiquitin transferase      103979318 Ubiquitin system [BR:mus04121]  Ubiquitin ligases (E3)   Single Ring-finger type E3    Other single Ring-finger type E3     103979318   Multi subunit type E3    Cul4 complex     Target recognizing subunit (DCAF)      103979318 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  WD40 WD40_Prp19 WD40_CDC20-Fz WD40_WDHD1_1st Beta-prop_EML_2 Beta-prop_TEP1_2nd WDR55 Beta-prop_RIG_2nd Beta-prop_EIPR1 Beta-prop_DCAF4 zf-C3HC4_2 WD40_MABP1-WDR62_2nd EIF3I Beta-prop_WDR19_1st WD40_MABP1-WDR62_1st Beta-prop_WDR90_POC16_2nd zf-C3HC4 Beta-prop_HPS5 Beta-prop_CAF1B_HIR1 Beta-prop_TEP1_C Beta-prop_EML zf-C3HC4_3 Beta-prop_WDR75_1st WD40_like WD40_RFWD3 zf-RING_2 zf-C3HC4_4 zf-RING_UBOX Beta-prop_WDR35_TULP_N Beta-prop_SCAP zf-RING_5 DUF1664 Beta-prop_DCAF12 YbfN zf-Nse U-box Motif Other DBs NCBI-GeneID:  103979318 NCBI-ProteinID:  XP_009393690 UniProt:  A0A804IEH9 LinkDB All DBs Position BXJ2-3:complement(35763033..35779097) Genome browser AA seq 700 aa AA seqDB search MGGASAGALVPSVSKAEEMGASVAPLAVSSSETTDVAGAPPPAEGATVPDGTRAAAAVKA EAEAEAERDKDLLCPICMGVIKDAFLTACGHSFCYMCIVTHLNNKSDCPCCGNYLTKNHL YPNFLLNKLLKKQCARQIEKTASPVEHLRLALQQGCEMSVKELDGLLSLLSDKKRKMEQQ EAEMNMQILLDFLHCLRKKKLEELNEVQTDLQFIKEDINAVEKHRAELYRARERYSVKLR MLLDDPIATKFWSSTADQHNSILVSNARSSLVGTCSRNLQVKSNDVKAQLSHQDYQRKDA LSGSETTNSLIQSGRVIARKRRIQAQFKELQECYLQKRRLGASQSHRQEEKDANAKVREG YHAGLDDFQSVLTTFTRYSRLRDIAELRHGDLFHSANIVSSIEFDRDDEFFATAGVSKRI KVFEFSTVVNEPSDVNCPVVELATRSKLSCLSWNKYSKNIIASSDYEGIVTVWDVTTRQS MMEYEEHEKRAWSVDFSRTEPTMLVSGSDDCKVKVWCTKQEASVINIDMKANICCVKYNP GSSVHVAVGSADHHIHYFDLRNTSTPLRIFKGHWKAVSYVKFLSTNELASASTDSTLRLW DVKDTCPVRTFKGHTNEKNFVGLTVNNEYIACGSETNEVFVYHKAISKPAAWHKFGSSDL DDAEDDAGSYFISAVCWKSDSPTMLAANSQGTIKVLVLAA NT seq 2103 nt NT seq  +upstreamnt  +downstreamnt atgggcggtgcgtcggcgggagcgttggtgccgtcggtgtcgaaggcggaggagatgggg gcgtcggtcgccccgcttgccgtctcgtcgtcggagaccacggacgtggctggggcgccg ccgccggccgagggggccacggtccccgacggaactcgggccgcggcggcggtgaaggcg gaggccgaggcggaggccgagcgcgacaaggatctgctctgccccatctgcatgggggtc atcaaggacgccttcctgacggcatgcggccacagcttctgctacatgtgcatcgtcacc cacctcaacaacaagagcgattgtccttgttgcggaaattacctcaccaagaatcacctc taccccaatttcctcctcaacaagcttttgaaaaagcaatgtgcccgtcaaattgaaaaa acagcatcacctgttgagcatcttcgtttggcattgcagcagggatgtgagatgtcggtt aaggagctcgatggtttgttgtctcttcttagtgataaaaagcggaaaatggagcaacaa gaggctgagatgaatatgcaaattttactcgactttttgcactgtcttaggaagaaaaag ctggaagagcttaatgaggttcaaactgatttacaatttatcaaagaagatataaatgct gtagagaaacacagagcagaactgtaccgggcaagagagagatactcggtgaaattgcga atgcttttggatgatccaattgcaacaaaattttggtcttccactgctgatcagcacaat agcatacttgtctcgaatgctcgtagctctcttgttgggacatgctctcgaaatttacag gtgaagagtaatgatgtgaaagctcaactaagccatcaagattaccaaagaaaagatgct ttaagtggatctgaaacaacaaattcccttattcaatcaggaagagtcatagcaagaaag agacgaattcaagctcagtttaaggagcttcaagaatgttacttacaaaaacggcgtctt ggagctagccaatcacatcgtcaggaagaaaaagatgcaaacgccaaagttagagaaggt tatcatgcgggtcttgatgattttcagtctgtgctaaccacatttactagatacagtcgg ttgcgtgatattgcggaacttagacatggagatctatttcattctgcaaatattgtgtca agcatagagtttgatcgtgatgatgagttttttgccactgctggtgtttcgaagcgcatt aaagtcttcgaattttctacagttgtaaatgaaccatcagatgtaaactgccctgttgta gaattggccacacggtccaaacttagttgcttaagttggaacaagtactccaaaaacatt attgcgagtagtgattatgaagggatagtaactgtttgggatgtgaccactcgccagagt atgatggaatatgaagaacatgaaaaaagagcatggagtgttgatttttcacggacggaa ccaacaatgttagtttctggtagtgatgattgcaaggtcaaagtgtggtgcacaaagcaa gaagccagtgttatcaatattgacatgaaagcaaatatttgttgtgtcaaatataatcct ggatccagtgttcatgttgcagttggttctgctgatcatcacattcactattttgatttg agaaacacaagtactccactccgtatttttaagggacactggaaagcagtttcatacgtg aaattcctgtccacaaatgagcttgcatctgcatcaacagacagtacattgcgattgtgg gatgtaaaggacacatgcccagtgcgcaccttcaagggacacacaaatgagaaaaatttt gtgggtttaacagtaaacaatgagtacattgcttgtggcagcgagacaaacgaggttttc gtgtaccataaggcaatctcgaagccagctgcatggcacaaattcggatcctcagatctt gatgatgcagaagatgatgctgggtcatattttattagcgctgtttgctggaagagtgac agtcctacaatgttggcagccaacagccaggggactatcaaagttctggtactcgcagct tag

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