Musa acuminata (dessert banana): 103980680
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Entry
103980680 CDS
T03447
Name
(RefSeq) katanin p80 WD40 repeat-containing subunit B1 homolog KTN80.4 isoform X1
KO
K18643
katanin p80 WD40 repeat-containing subunit B1
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04812 Cytoskeleton proteins [BR:
mus04812
]
103980680
Cytoskeleton proteins [BR:
mus04812
]
Eukaryotic cytoskeleton proteins
Microtubules
Tubulin-binding proteins
Microtubule severing proteins
103980680
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
WD40
Katanin_con80
WD40_Prp19
WD40_CDC20-Fz
WD40_WDHD1_1st
Beta-prop_EML_2
EIF3I
Beta-prop_WDR90_POC16_2nd
WDR55
Beta-prop_TEP1_2nd
WD40_MABP1-WDR62_2nd
Beta-prop_CAF1B_HIR1
ANAPC4_WD40
Beta-prop_EML
Beta-prop_WDR75_1st
Beta-prop_TEP1_C
Beta-prop_SCAP
WD40_MABP1-WDR62_1st
NBCH_WD40
Beta-prop_DCAF4
Beta-prop_EIPR1
Beta-prop_IFT122_1st
WDR90_beta-prop_4th
Beta-prop_IFT140_1st
Beta-prop_SPT8
eIF2A
Beta-prop_HPS5
Beta-prop_WDR19_1st
Beta-prop_VPS8
Beta-prop_Vps41
Beta-prop_IP5PC_F
Beta-prop_DCAF12
PROPPIN
Beta-prop_RIG_1st
WDR54
Motif
Other DBs
NCBI-GeneID:
103980680
NCBI-ProteinID:
XP_009395414
UniProt:
A0A804ILC0
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Position
BXJ2-4:complement(4103529..4116742)
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AA seq
778 aa
AA seq
DB search
MATTKRAYKLQEFVAHSSSVNCLKIGRKTSRVLVTGGEDNKVNIWAIGKPNAILSLSGHM
SAVESVSFDSSEILVAAGAASGSVKLWDLEEAKIVRTLTGHRSNCIAVDFHPFGEFFASG
SLDTNLKIWDIRRKGCIHTYKGHSRGVNAIKFTPDGRWVVSGGEDNTVKLWDLTAGKLLH
DFKFHEGQIQCIDFHPHEFLLATGSADRTVKLWDLETFELIGSAGPETSGVRSMTFNPDG
RTLLCGLHESLKVVSWEPIRSHDTVDVGWSRLSDMNIHEGKLLGCSYNQSCVGVWVVDLS
RIEPYAISGAARSNGHSEPKSTSSGNPSTQTDNNIKSSMGRLSISQSSEANAKETKPEAS
AASIPGTPQRTGTNAGVKTTTTAPTPVSTTSKRSSSKAQAMTNLQTINKSDIMPVIVPRT
NPRVELSSDSTKVTGVGRTIPYDIQSKFANFRKVSNIRENSDKADMSIESGLVGNRNTEQ
NEYLGQTSISSANAVTQLVTAGENNQDGVRRVITGRGRLNSFRESTANYDQENYNIKIEK
PKEVCPIDVPQRGRTRSIASNWERRECSPSYEGPVSSNSSETMMATSSLYSLRGHNRFAE
ETVPASDEDSISILLEKHDQFLNLTQSRLIKLQVVSRLWERNDVKGVVGAIEKMSDYAVS
ADVLGCLKDKGDIVTLDICTSLLPLLTGLLESNMDRHVGVSLGMLLTLVRIFGPVIHSTL
SAGPSVGVDLQAEQRLERCNSCFIELEKVKHRISSMSRRGGSIAKAAQELNLALQEVL
NT seq
2337 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccaccaagcgcgcttacaagctgcaggaatttgtggcgcattcttccagcgtc
aattgcctgaagattgggagaaagacatcgagagttcttgttactggaggagaggacaac
aaggtcaatatttgggctattggaaaacctaatgccatattgagcctatctggtcatatg
agtgctgttgagtcagtaagttttgattcatcggagatattggtagctgctggtgcagct
agcggctcggtaaagttgtgggatttggaagaggcaaagattgttcgaactctgaccggc
cacaggtcaaattgtatagctgttgactttcatccatttggagagttctttgcttctgga
tctctggatacaaatctgaagatatgggatattagaagaaagggatgcattcatacatac
aagggtcacagccgaggggttaatgctattaaattcacccctgatgggcggtgggttgtt
tctggtggagaagacaacactgtgaagctttgggatcttactgctggaaaacttttacat
gatttcaagtttcatgagggtcagattcagtgcattgatttccatcctcatgaatttctg
ctggcaacaggttcagctgatagaactgttaagttatgggatcttgaaacttttgagcta
atagggtctgctggacctgagacttctggtgtgcgttctatgacgtttaatcctgatggg
agaacattgctttgtggattgcatgagagtctgaaggttgtttcctgggaaccaataaga
agccatgatactgtggatgtaggatggtctagactatcagatatgaacattcatgagggt
aaacttcttggatgttcatacaatcaaagctgtgttggagtatgggttgtggacctttct
cgcattgagccatatgcaatttctggtgctgctagatcaaatggtcattctgaaccaaag
tctacatcaagtggtaatccatctacgcaaactgacaacaatataaagtctagcatgggg
aggctatcaatatcacaaagttcagaagcaaatgctaaggaaacaaaaccagaagcatca
gctgcaagcatccctggtacccctcaaagaactgggacaaatgctggtgtaaaaacaact
acaacagcacctacacctgtttctactacttcaaaaagaagttcatcaaaagctcaggct
atgacaaatcttcagacaatcaataaatctgatataatgcctgtcattgttccaagaact
aacccacgagtagagttgtcctctgattctactaaggtgactggagttggaagaacaata
ccatatgatatccaatcaaaatttgctaattttcggaaggtatcaaacatcagagagaat
tcagacaaagcagatatgtccattgagtctggacttgtgggtaatagaaacactgaacaa
aatgaatatttgggccaaacttctatttcttctgccaacgctgtaactcagctagtgact
gctggagaaaataaccaggatggtgttagacgtgttataacaggtaggggacgattgaac
tcattcagagagtcaactgcaaattatgatcaggaaaattataatatcaaaatcgagaag
ccaaaggaagtgtgccctattgatgttccacaaagaggaagaacaaggtcaattgcttca
aactgggaaaggagggaatgttctccaagctatgaggggccagtgtcaagcaattcctct
gagacaatgatggctactagctccttatattctttgagaggtcataatcgatttgctgaa
gaaactgtacctgcctctgatgaggattccatttctattttattagaaaaacatgatcaa
ttcttaaacttaacacagtctcggttgatcaaactacaggtagtttcccggctttgggaa
agaaatgatgtcaagggcgttgttggtgcaattgagaagatgtctgattatgctgtttct
gctgatgtattgggttgtttgaaggacaaaggtgatattgtcactctagatatttgcacg
tctctcctaccgctccttactggccttcttgagagtaacatggataggcatgtaggtgtt
tccttgggaatgttgctgacacttgtcagaatctttggtcctgtaatacattcaaccttg
tcagctggtccatctgttggtgttgatcttcaagcagagcagaggctggaacgttgcaat
tcgtgcttcattgagttggaaaaagtcaagcataggatttcttccatgagtagaagagga
gggtctattgcaaaggctgcacaagagctgaatctcgctcttcaggaagtactgtga
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