Musa acuminata (dessert banana): 103981290
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Entry
103981290 CDS
T03447
Name
(RefSeq) preprotein translocase subunit SCY1, chloroplastic isoform X1
KO
K10956
protein transport protein SEC61 subunit alpha
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03060
Protein export
mus04141
Protein processing in endoplasmic reticulum
mus04145
Phagosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
103981290
04141 Protein processing in endoplasmic reticulum
103981290
09140 Cellular Processes
09141 Transport and catabolism
04145 Phagosome
103981290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mus04131
]
103981290
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
mus02044
]
103981290
Membrane trafficking [BR:
mus04131
]
Endoplasmic reticulum (ER) - Golgi transport
Others
SEC61 complex
103981290
Secretion system [BR:
mus02044
]
Sec (secretion) system
Eukaryotic Sec-SRP protein
103981290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecY
TssN
Motif
Other DBs
NCBI-GeneID:
103981290
NCBI-ProteinID:
XP_009396241
UniProt:
A0A804IP20
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Position
BXJ2-4:9581588..9589566
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AA seq
557 aa
AA seq
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MLLSARELLSAPSHGIPFSTFPFARSRAASLAFARSRGGPCRASSSGAADAEPRRRSVSW
DTLRLNFSDGSRCIQPSDFSVFDPLGLNKESSLGLGALWESVLDFFSQTFESTASSKKDK
SSSKRGVAAAIEDSSIDIGDFFKGPLPGKFLKLLGYLTLSRLGVYVPLGGVNREAFVGNL
DQNSLLSTLDSFSGGGIGRLGVCSLGIVPFINAQIVFQLLTQIYPKLQDLQRREGEAGRK
KVLQYTRYASVGFAVFQAIGQVVYLRPYVNDFSTEWVLSSVVLLTLGSVFTTYIGERISD
LKLGNGTSLLIFTSIISYLPASFGRTIAQAFQDGNYVGLATITLSFFLLVLGIVYVQEAE
RKIPLNYASRYRSGGLQKSAYLPFKVNSSGVMPIIFSTSSLALPGTLARFTGLTALKKAA
VALNPGGPLYLPTNVLLIAFFNYYYTFLQLDPDDVSEQLKRQGASIPLVRPGKSTAAFLK
TVLSRISVLGSAFLAVLAAGPSVIEQTTHLTAFRGFAGTSILILVGCATDTARKVQAEII
SQKYKNIEFYDINQYGP
NT seq
1674 nt
NT seq
+upstream
nt +downstream
nt
atgctcttatccgcgcgggagctactgagcgccccttcccatggcattcccttctccacc
ttccctttcgcccgctctcgagcggcttccctcgccttcgcgaggtcccggggcggtccc
tgtagggcttcctcctccggagcggcggacgcggagccccgacggcgaagcgtttcctgg
gacactctccgtttgaacttcagcgacggctccaggtgcattcaaccatctgatttctct
gtctttgatccgttgggtttgaacaaggagagctctttgggccttggtgctttgtgggaa
agtgttcttgatttcttttcccaaacatttgaaagtacagcaagttcaaagaaggataaa
tcttcctcaaaacgaggagtggcagctgcaattgaggatagttctattgacattggtgac
ttctttaagggccctcttccagggaaattcctaaagcttttaggatatttaactttatct
cggcttggagtatatgtacctctaggtggagtgaatcgagaagcttttgttggtaatttg
gatcagaacagtctattgagcaccttggactccttctctggtggtggaattggtagactg
ggtgtctgctccctaggtattgttccatttatcaatgcacagattgtctttcagcttctt
acacaaatctatccaaagctacaagatctccagagaagagaaggagaagcaggaaggaag
aaagttcttcagtatacacgctatgcttctgtaggctttgcagtgttccaggccattggg
caagtagtttaccttcgcccatatgtcaatgacttcagtacggaatgggttctatcatca
gtggtattgttgacactcggatcagtatttacaacttacattggtgaaagaatatccgac
ctgaaacttggaaatggaacctctcttttgatattcaccagcattatatcatacttgcct
gcatcatttggcagaacaattgcacaggcatttcaagatggaaattatgttggactagct
acgattaccttgtcatttttcctattggtccttggtattgtgtatgtccaggaagcagaa
aggaagatcccactaaactatgcttcaagatacagaagtgggggccttcaaaaatctgca
tatcttccttttaaggtgaatagctccggagtgatgcccattatattttcaacttcttcc
ttggctttacctggcactctggcacgcttcactggtttaactgctcttaaaaaggctgca
gttgctttgaacccaggaggtcctttatatcttcctactaacgtcctactcattgctttt
ttcaattattattatacttttctacaattggaccctgacgatgtgagcgagcagttgaag
cgccagggggcttcaataccacttgttcgacctggaaaaagcacagctgcttttcttaaa
acagttcttagccggatatcagtactgggttcagcttttctggcagtgctcgcagctggc
ccgtctgttatcgaacaaacaacacacttgactgctttccgtggatttgctggtacatct
attctaattctcgtgggatgtgcaactgatacagcaagaaaagttcaggcagaaatcata
tcgcagaagtacaagaacatcgagttttatgacatcaaccagtatggcccttga
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