Musa acuminata (dessert banana): 103983323
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Entry
103983323 CDS
T03447
Name
(RefSeq) putative CCR4-associated factor 1 homolog 8
KO
K12581
CCR4-NOT transcription complex subunit 7/8
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103983323
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103983323
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
103983323
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
103983323
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
Motif
Other DBs
NCBI-GeneID:
103983323
NCBI-ProteinID:
XP_009398821
UniProt:
A0A804IY64
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All DBs
Position
BXJ2-4:46016516..46017541
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AA seq
341 aa
AA seq
DB search
MAVTVVTENIAAQLDLLVDLRRSFRYAAIDTEFPGFIRPTPPYASEEDRYADVKYNVDNM
KLIQLGITLFDENGSTPWQGCCWQFNFSDFDPLVHPSSPKSLELLRRSGHDLEGNRRNGI
NGDKRSNVLRNKLFDRRYGSVYVTFHGLYDVAYVIKLITGGAPLPPTLREFIAAARRVFG
ALYDIKYIAKYCDGLSGREFGLTRLAQELVVEQDGNPHQAAYDSLSISRVFNEMNRRYNI
GGNERFVSVLYGLENSCTESKKRYQRGTMVYHPDYVGQYGFQAHSGIPPLPPTPMFVFLP
QVGPPLHQAYGAPSSPESQQQQSTLSCHGYVSGMGNVKVRR
NT seq
1026 nt
NT seq
+upstream
nt +downstream
nt
atggcagtgacggtcgtcaccgaaaacatcgccgcccagctcgatcttctggtcgatctc
cgtcgatcttttcgttatgctgccatagatacagaattccctggattcatccggccgacg
cctccctatgcttccgaggaagatcggtatgccgacgtcaaatacaacgtcgacaacatg
aagctgatacagctcggaatcacgttattcgatgagaacggcagcactccatggcagggc
tgctgctggcagttcaacttctctgatttcgatcccttggtgcatccttcgtcgcctaag
tcgctcgagctgttgcgccggagcggccacgacctcgagggaaaccggcgaaacgggatc
aatggcgacaagcggagcaatgttttgcgcaacaagctctttgatagacgctacggctcc
gtttatgtcaccttccatggcctctacgatgtggcctacgtgatcaagctgatcaccgga
ggagcgccgctgcctccaaccttgagggagtttatagctgcagcgaggcgagttttcggt
gcattatacgacatcaagtatatagcaaagtattgcgatggattaagcggaagagaattt
ggcctgacgaggcttgcacaagaactggtagtggaacaagatgggaaccctcatcaagcg
gcatacgacagtctatcaattagcagagtgttcaacgagatgaatcggaggtataacatc
ggagggaacgagaggttcgtctccgttctttatggcttagagaacagttgcacggagagc
aagaagaggtatcaaagaggtaccatggtctatcatccagactacgttgggcagtacggg
ttccaagctcacagtggaatccctcccctcccccccaccccgatgtttgtgttcctacct
caagtcggcccgccgttgcatcaagcttatggggctccgagttcaccggagtcccaacaa
cagcaaagcaccctttcatgccacggctacgtttccgggatggggaacgtgaaagttagg
cgttaa
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