Musa acuminata (dessert banana): 103983790
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Entry
103983790 CDS
T03447
Name
(RefSeq) uncharacterized protein LOC103983790 isoform X1
KO
K14772
U3 small nucleolar RNA-associated protein 20
Organism
mus
Musa acuminata (dessert banana)
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
mus03009
]
103983790
Ribosome biogenesis [BR:
mus03009
]
Eukaryotic type
90S particles
U3 small nucleolar RNA-associated proteins
103983790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UTP20_N
UTP20
UTP20_C
TPR_Trm732_C
HEAT_GCN1
RYDR_ITPR
UME
KH_SLS1_2
DUF1997
Motif
Other DBs
NCBI-GeneID:
103983790
NCBI-ProteinID:
XP_009399347
UniProt:
A0A804J069
LinkDB
All DBs
Position
BXJ2-5:complement(1921752..1948948)
Genome browser
AA seq
2711 aa
AA seq
DB search
MATSQSHAVKSLNTSSGRRRFVFKSFSQRVEEIDINVYRSLDPVKAQPSAGSSFLRESLV
YWRELNTAEDFISFYEKMMPLVQTLPQVILHKEIIMSELLDRLHVKARLSLEPILMLISA
LSRDLLDEFLPFLQRLTNALVDLLRNGGDHDPEILEQVFTSWSYIMMYMQKYLVKDVVYV
LKMTIHLRYFPKDYIQEFMAEAVSFLLRNACKVQLWKGVSKVIMEVAKSSSMRRTGVTAL
LWHVMRGAPSMLHSKAETVWHLLMDKSIFSLGEKYPEGQDALLQVTIGIIRRLCNEINPE
ELKVIFHSLIKEILNCISDGDLEHLNHLLSLLTFAVCNIDGSKVYDRQKILDLVSSLIQS
FVVPSISVEMEDLPSKVLSRVLELMLCLLDVPLISVDMSSILLLYAPVFKLKSSRLLEFL
RGFILKDPEIVHVFRSHILSVMGDLVEVSPEEALFLMMAFFEKQRKQQICDVVGVSEDKV
LKLCKFSNEFIIYWIKLLHDNTGNSDQLNEQVSEMEMAILWGVVSCYPYLPYSQDSLVLI
KDLIVTIDQLLETEIEKNASFPKSTWQSIIGAALSSFHKLLLVKKLGPSETGIFLHLAKR
HKSSLQVLSAVAEYSDSVFGSKAEGASSWNVFQEFDVQDVIDSVTSFTDNLSLPNKAVRV
STLRILSHYAPLDHTLLTSDVGPHKKLKTEESEASVVASQCIDVIELLLSVELTPLSIST
SRKIVILLSKLQMSLSSGRINDIYIPLLLNGIIGILHNRFSHIWEPALDCLTILIGRHKE
LAWNSFVHYLDSCQSKFLCSGNHLVKLNSGSSQPKELIDCFKLFLVPEFDCTPSMMVTTL
LLQSLQKIPEIAESRSRQLIPLFFKFLGYSGDDCFSVESYTDHACKGMDWKMILKEWLNL
LVQMRNALSLYRSPVLKEVLVKRLLDEVDPNIQLKVLDCLLNWKNDFMVSYDEHLKNLIL
SKNIRNELTTWAVSEESECIQEGHRHHLIPIIIRLLTPKVRKLKTLGSRKHTGVSHRRAV
LCFLAQLEVEELQLFFSLLLKPLIPRHLTNELFDSLNDEPSGGLIGGSQSSILIKCSTSI
EVANVSWKKKNGFVHVVEEILRTFDESRIKPYLNPLMMIVVWILENCMLNLASENRNRAV
NIAESLSGNLPDHEVRTAARNSLLITAKQFKDLRSLCLKVISFVLNKYGSHDFGSDFWNI
FFSSVKPLIDSFKHEGSSSEKPSSLLSCFVAMSRSHVLVPLLDKEANLVPTIFSMLTVRT
ASDAIISSVLSFIENLLNLDNSEDHQENDSPKGILVPHLDVLIQSFHLLLQSRKVHRKCT
TWPGTSELRIFKLLVRYITDPTIAEQFVDILMPLFKKKDSSPDEALEGLHVLKGILPVVG
SESSGKILEAIHPLLVSAGLELRLCICDILNRLVLIDPSLAFVARLLHGLNAVSSSEIGE
LDYDTRVNAYETVRPELFAKLKVEHALLILSHCVYDMASDELIFRQSASRALHSFIHFSA
SVLNNSESNSAEMLFNDGSHEDTTNLIVKKEDTVITWTKSCIKQIVNKTFLKNIGDAMTK
DISVQKEWIAVLRDMVYHFQGLPSLNSFRPLCSEDPEVDFFNNILHLQIHRRRRALSRFR
NVLGAGNLTEDVILKVFLPLFFNMLIDVQDGKGEDIRNACMETLACISGHMHWEPYRHFL
MRCFREMIRRPDKQKLLLRLICAILDMFHFSHMNLSEVMEGGTELTTEVKSTNALPSIES
HSDVSEVQKFLQNILMQIQKLLTSDTEKVNVNISLAAIKVLKLLPVEIMESQLSSIVHQI
CTFLKNRLESIRDEARSALAACVKELGLEYLQFVVKILQAILKRGYELHVLGYTLNFILL
KTLSNPAVGKLDYCLDELLFVAENDILGDVAEEKDVDKIASKMKETRKRKSFETLKLISQ
SITFRTHAMKLLLPIKAQLQKYTTPKMKVRLEMMLQHIALGIECNSSVELSELFIFVYGL
IEDGISPEGSHGNEISTNGINKKPVHDGSQNRDTSSHCKLGPHNSHLIVVFALGLLHNRL
KNMKLEEDEQLLSMLDPFIKLLGDCLSSKYEGVLAASFRCLAPLVRLPLPSLQGHADKIK
ILLLEIAQKSGNVGSPLVQSCLKLLTVLLRSTRISLSKDQLHMLIQFPVFIDLQTKPSPV
ALSLLKSIVDRKLVAHEIYDIVMQVAELMVTSHSEPIRKKSSQVLLQFLLDYRLSDKRLQ
QHMDFLLSNLSYEHSSGREAVLEMLHAILIKFPKSVVDNQAQSFFLHLVVALANESDSKM
RAMVATVIKVLLSRTSQHATRPILGYSLSWYMGEKQHLWSASAEVLGLLVEVMTKDIREH
ITSILHVAKGILEASIHAASNKGLDIMNEPAIPLWKEAYYSLIMLEKMLQYFPELYFERN
LEEIWVIICKFLLHPHIWVRNISSRLVASYFIAVTEASKTDNQQLKSGGYFLVNPSRLFA
VAVSCLNQLKTSLIDDTMSNLITQNLVFSVCGLHSRLINSLVPHDYWSTLDSSEKGVYLE
AFEFLGSKKAKSSFLLSTTIRSNFSGTSDEADEDNGEDVRSLLVVPLIKRMGKIAMHMED
VQMRIAFNSFKMISLQTGSEGSRSYAIHMLGPLYKACEGFAGKVISGEIKQLAEEVRDSL
RDVLGVDSFVQVYNRVRKNVKQKRDKRRQEQKLLAVINPMRHAKRKLRISAKHRAHKKRK
IMSMKMGRGIR
NT seq
8136 nt
NT seq
+upstream
nt +downstream
nt
atggcgacctcgcagtcgcacgccgtcaagtcactcaacacctcctccggccgtcggcgc
ttcgtcttcaaaagcttctcccagcgggtggaggagatcgatatcaacgtgtaccgtagt
ctggaccccgtgaaggctcagccctctgctggctcctccttcctacgagagagtctcgtt
tactggagggaattgaatacggcggaggacttcatctcgttttatgaaaagatgatgccg
ttggttcagacgctcccgcaggtcatactgcacaaggaaattataatgtcagagcttctt
gatagattgcatgtgaaagcaagattgtcactcgaaccaatcctaatgttaatctcagca
ttgtccagagatttactagatgagtttctaccttttttgcaaaggcttacaaatgcttta
gtagatcttcttagaaatggcggcgatcatgatcctgaaatcttagaacaggtctttaca
tcttggtcatatatcatgatgtatatgcagaagtatcttgtgaaggatgttgtttatgtt
ctcaagatgacaatccacttaagatatttcccaaaagattatatccaagaatttatggct
gaggctgtttcattcttgctgaggaatgcatgcaaagtccagctgtggaaaggtgttagc
aaggttataatggaagtcgcaaaaagttcatctatgaggagaacaggagttaccgctttg
ctgtggcatgtgatgcggggggctccatcaatgcttcactcaaaagctgaaacggtctgg
cacctcttgatggacaagtccatttttagtcttggtgaaaaatatcctgaaggtcaggat
gctcttcttcaggttacaataggcattatccgtcggttatgcaatgagatcaaccctgaa
gaactgaaagtgatattccactctttgatcaaagaaatattgaactgcatcagtgatggt
gacttggaacacctgaatcatttattgtctcttcttacatttgctgtctgcaatattgat
gggagcaaagtgtatgatagacaaaagatacttgatcttgttagctcactcatacaatca
tttgttgtgccttccattagtgtagaaatggaagacctaccatctaaagttcttagtaga
gtactggaattgatgctctgccttctagatgttccgcttatttctgttgatatgtctagc
atcttgctgctgtatgctcctgtattcaagttgaaaagttcaaggctactggaattttta
agggggtttatcctgaaagatcctgagatagtgcatgtatttagaagccatatattaagt
gttatgggtgatttagttgaagtttctcctgaagaagctctttttttgatgatggcattc
tttgaaaaacaaaggaaacaacaaatttgtgatgttgtaggagtatctgaagacaaggtt
cttaagttgtgcaaattttcaaacgagttcatcatatactggatcaagttattacatgat
aacacaggaaacagtgatcaattaaatgagcaagtttctgaaatggagatggctatccta
tggggagttgttagttgctatccttatttaccatattcacaggatagtttggtgctcata
aaagatctcattgttactattgatcaacttctggaaactgagatagaaaaaaatgcaagt
tttccaaagtccacttggcagagtattattggtgctgcattgagttcttttcataaacta
ctactagtcaagaagcttggaccttcagaaacaggcatatttttgcatcttgcaaagaga
cacaaatcatctctccaagtattgtctgcagttgctgaatattcggattctgtctttggg
tccaaggctgagggagcttccagttggaatgtatttcaagagtttgatgttcaggatgtt
atagactcagtgacttcatttacagataatttgagtcttccgaataaggcagttcgggta
tccactttgagaatattgtcccattatgcaccattagatcatactctgctcacaagtgat
gtgggtcctcataagaaattaaaaactgaagaatctgaagcaagcgttgtagcctcccag
tgcattgatgttattgagcttctcctttctgttgagctgactcctctttctatctccaca
agccggaaaatagttatacttctttccaagttacaaatgagtctttcttcaggaaggatt
aatgatatttatattcctcttctcttaaatggaattattggaatcttacataatcggttt
agccatatatgggagccagcattagattgcctcactattttgataggcagacataaggag
cttgcttggaatagctttgttcattaccttgatagctgtcagtccaaatttttatgctct
ggcaatcacttggtgaaacttaattctggaagttctcaaccaaaagagctgattgactgc
ttcaaattatttcttgttcctgaatttgattgcacgccttccatgatggtaacaacactg
ttacttcaatcacttcaaaagatccctgagattgctgaatctcgctctcgacaacttata
ccattgttcttcaaatttctgggttatagtggtgatgattgtttcagtgttgaatcatat
actgaccatgcttgcaaaggaatggattggaagatgatactcaaagagtggctgaactta
ctggtacaaatgcgtaatgctctatctttatatcgcagtccagttctcaaggaagttcta
gtgaaaaggcttcttgacgaagtcgatcccaacatacagttaaaagttctggattgcttg
ttgaattggaagaatgactttatggtctcatacgatgaacatcttaagaatttaatctta
tcaaagaacatccgcaacgaacttactacatgggctgtttcagaagagtcagagtgcatt
caagaaggacacaggcatcaccttattcctataataatcagattgttaacaccaaaagtt
aggaagctaaagacacttggttcacggaagcatacaggtgtaagtcacagaagggcagtt
ctttgtttcttggcacagcttgaagttgaggagcttcagctttttttttctttacttcta
aagccattaattcccaggcatcttacaaatgaactctttgattctttgaatgatgagcca
tctggagggttgataggtggatctcagtcatccatccttatcaaatgttcaacctcaatt
gaggtagctaatgtttcatggaaaaagaaaaatggcttcgtgcatgtcgttgaagaaatt
ctaagaacttttgatgagtcacgcatcaagccatatctcaatccactaatgatgattgtt
gtttggatactggagaactgcatgttgaatcttgcaagtgaaaacagaaatagagctgtt
aatattgcagagagtttatctggtaacttaccagaccatgaggtgaggactgcagcaaga
aattctcttttgatcactgccaaacaattcaaggatttgcggtccttatgcttaaaggtc
atttcttttgttcttaacaagtacgggagtcatgattttggatcagatttctggaacatc
ttctttagttctgtaaagccattaatagacagctttaaacatgagggttccagcagtgaa
aagccaagctcacttctttcgtgctttgttgcaatgagcagaagccatgtgcttgttcca
ttattagataaggaggcaaatcttgtccctacaattttttcaatgttaactgtgaggact
gcatcggatgccatcatatcttcagtactcagttttattgaaaatttgttgaatttggat
aacagtgaggatcatcaagagaatgattctccaaaaggaattttggtgcctcatctagat
gtactcattcagagtttccatttgcttttgcagtcacgaaaagttcaccggaaatgtacc
acatggcccggaacttcagaattgagaatatttaaacttttggtgagatatatcactgac
cctaccatagctgagcaattcgtggacatccttatgcctttatttaaaaagaaagacagc
agtcctgatgaggcgttggaaggtttacatgttctcaaagggatcctgccagttgtgggg
tctgaatcatctggcaaaattctagaggccatccaccccttgctagtttctgctggattg
gaattgcggttatgcatctgcgatattctgaatagacttgtgttaattgatccttcatta
gcctttgtggccaggcttttgcatgggttgaatgcagtttcttcgtcagaaattggtgag
cttgattatgacacaagagtcaatgcttatgagacagtaaggccagagttgtttgctaag
ctgaaagtggagcatgcgttgttgatattatcacattgtgtatatgacatggcatctgat
gaactgatctttcgacaaagtgcatctagggcattgcattcattcattcatttttctgca
tcggttttgaacaacagtgagagcaattctgcagagatgttgttcaatgatggatcacat
gaagacactacaaatctaattgtgaaaaaagaagatactgtaattacttggacaaaatcc
tgcatcaagcagatagtgaataaaacatttctgaagaatataggggatgctatgaccaaa
gacatttctgtccagaaagaatggattgctgtgctacgtgatatggtttatcattttcag
ggattgccatctctgaattcatttagacctctgtgcagtgaggatcctgaagtagatttt
tttaataatattcttcacttgcagatccataggagaagaagggcactgtcacgttttaga
aatgtccttggtgcagggaacctaacggaggatgttatcctcaaagtctttcttccactg
tttttcaatatgttgattgatgttcaagatggaaagggagaggatatcagaaatgcatgt
atggaaacacttgcttgtatttcaggtcatatgcattgggaaccctaccgtcacttttta
atgagatgcttcagagagatgatccgtaggcctgacaaacaaaaactcctgttgcgtttg
atatgtgccatcctagatatgttccatttctcgcacatgaatctcagtgaagtcatggaa
ggcgggactgaactaactactgaagtgaagtccacaaatgcattgccttcaattgagtcc
cactcagatgtctctgaagtgcaaaagtttttgcaaaatatactcatgcagattcaaaag
ctactgacttcagacaccgagaaggtcaatgttaacatcagtcttgctgccatcaaagta
ctaaagctgctcccagtggaaatcatggaatcacagctttcaagcatagttcatcagatt
tgcacctttttgaagaatcgtcttgaaagcatacgggatgaagcaagatctgccttagct
gcctgtgtgaaggagcttggactggaatacctgcagtttgtagttaagattttgcaagca
atactaaaaagaggatatgagttgcatgttttaggttataccctcaactttatattattg
aagactctttctaatccagctgttggcaaacttgattattgtttggatgaactactcttt
gtggctgagaatgatattcttggagatgttgctgaggaaaaagacgttgataagattgcc
tcaaaaatgaaagagacaagaaagaggaagtcatttgagactctgaaattgatttctcag
agcattacattcagaacacatgctatgaagttgcttttacctatcaaggcacagctccag
aaatacaccacaccaaagatgaaggtgaggcttgagatgatgctgcaacatattgctcta
ggtattgaatgcaattcttctgttgaattgtctgagctttttatttttgtctatgggctc
attgaggatggcatcagtccagaaggatctcatggcaacgagatatccactaatgggata
aataagaaacctgttcatgatgggtctcaaaacagggatacttcaagtcactgcaaactg
gggccacataattctcatctgattgttgtatttgcccttggattattgcataatcgtttg
aagaatatgaagttggaggaagatgaacaactattgtcaatgttagatcccttcataaag
ctgctgggagactgcttgagttctaaatatgaaggtgttttggcagcttctttcagatgt
cttgccccattggtgagacttcctttgccatcccttcaaggtcatgctgataaaatcaag
attttgcttttggaaattgctcaaaaatcaggaaatgttggcagtccgttggtgcagtcc
tgtctaaagctgctaacagtgctactacgaagtactagaatttcactgtcaaaagatcag
ctgcacatgctaattcagtttccagtttttatagatcttcaaactaaaccttcccctgtt
gctctctctcttttaaagtcaatagttgatcgaaagctggttgcccatgaaatatatgac
attgttatgcaagttgctgaactgatggtaacaagtcattcagaaccaatacgcaagaag
agcagccaagttctgttgcaatttctacttgattatcgtctttctgataagcgcctgcaa
caacatatggatttcttactatcaaatttaagctatgaacattcatccggaagagaagct
gtgcttgagatgttgcatgccatcttgatcaagtttcccaaaagtgttgttgataatcag
gcacaatcctttttcctccatttggtggtggctctagcgaacgaatctgatagtaaaatg
cgagccatggttgctacagtgataaaggtactgttaagtcgcacgagccaacatgcaaca
cgtcctattttggggtacagtttgtcatggtatatgggtgaaaagcagcacttatggagt
gcttctgcggaggttcttggtttgctggttgaagttatgacaaaagatattcgggaacat
ataactagtatattgcatgttgcaaaaggtatcctggaagcttctattcatgctgctagc
aataagggtcttgacattatgaatgaacctgcaattccactatggaaggaggcttactat
tctcttattatgctggaaaagatgctgcagtacttcccagagttatattttgagaggaac
cttgaggaaatatgggtgattatatgcaagtttctgctgcatccacacatctgggtccgg
aatatttccagccgccttgtggcctcttatttcattgctgtgacagaagccagtaaaacc
gataaccaacagctgaaatctggaggctattttcttgtaaatccaagcagactttttgct
gtagctgtttcatgcttgaatcagctgaaaacttctctaattgatgacacaatgagcaat
ctcataacccagaatcttgtattttcagtctgtggtttgcactccagactaataaattca
cttgtgccccatgactattggtcgactcttgattctagtgagaagggtgtctacctcgag
gcttttgaatttcttggttcaaaaaaagcaaagagttcattcttattatctaccaccatc
agaagtaatttttctgggacaagtgatgaagctgatgaggacaatggtgaagatgtcagg
tcattgcttgttgtacctctgatcaagaggatgggaaaaattgcaatgcacatggaagat
gtacagatgcggattgccttcaattccttcaagatgatttcattacagactggttctgaa
ggttcccgttcttacgctatccacatgttgggtccgctctataaagcatgtgaaggattt
gcggggaaggtcatcagtggtgaaatcaaacagttagccgaagaggtccgtgacagcctc
agggatgtgctgggggttgatagctttgtgcaggtttacaatcgggttaggaagaacgtc
aagcagaagagggacaagagaagacaggagcagaagctccttgctgtcatcaaccccatg
cgccatgccaagaggaagctgcgaatcagtgccaaacaccgagcccacaagaagaggaag
atcatgtcaatgaagatgggaagaggaataaggtag
DBGET
integrated database retrieval system
