Musa acuminata (dessert banana): 103984035
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Entry
103984035 CDS
T03447
Name
(RefSeq) THO complex subunit 5A isoform X3
KO
K13174
THO complex subunit 5
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03013
Nucleocytoplasmic transport
mus03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
103984035
09122 Translation
03013 Nucleocytoplasmic transport
103984035
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mus03019
]
103984035
03041 Spliceosome [BR:
mus03041
]
103984035
Messenger RNA biogenesis [BR:
mus03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
103984035
Spliceosome [BR:
mus03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
103984035
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FmiP_Thoc5
RWD
UQ_con
Motif
Other DBs
NCBI-GeneID:
103984035
NCBI-ProteinID:
XP_018681903
LinkDB
All DBs
Position
BXJ2-5:complement(4180125..4187607)
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AA seq
779 aa
AA seq
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MEVDAPRRTAHELLEETRTAMEEVVSGMLLIKKEGRPKSELRELITEMSLNFIAFRQVNR
SILMEEDRIKAETEGAKGPVDTTTLQLHNLMYEKNHYLKAIKACKDFRSKYPDIELVAEE
EFFSSAPEDIKGKVLANDGAHDLMLKRLNFELFQRKELCKLHEKLEQHKASLLDTITSRK
KFLSSLPSHLKSLKKASLPVQQQLGILHTKKLKQHHAAELLPPPLYIVYSQLLAQKEAFG
EKIEMEILGSIKDAQTFALQRINKENGMSSNPENNRVEDDAPDEEEDVQRRRKRPKKNVM
KDSVEQAGVYQLHPLKIILHIYDDEDCRAKPSRLITLKFEYLVKLNAVCVGVDDAEEGSD
SSILCNLFPDDTGLELPHQMAKLYSGDSLAFGERRTSHPYKWAQHLAGIDFLPEVPPIHA
NGETLNPELVKASDVTSGLAVYRHQNRVHTILQRIRSRKKAQMALVEQLDSLMKLKWPLL
ACENVPWALHTPLCTLQSWSPAGLIPDSSFSAGMVGEATNFVDMDLDRRSVTSWEVESAR
EDGELPTALPVATMSVNSSLGLPNESFQHAEHSRSLALISKNVTPTKMVKTRSFSKYEDE
LERILDSESELEEQACVDQLTENMTSIVCKPWEDHAAREFDLVLSRTCGNDRIVKLNAKV
KISVEYPLRPPIFTLSTDSGHCNLYNVLRAMEAEVNLHILKILQLDHENYILAHQIRCLV
MLFDFHFDLHDEKRKNTSVIDVGLCKPVSGTILARSVRGRDRRKMISWNGTDCIPGQTR
NT seq
2340 nt
NT seq
+upstream
nt +downstream
nt
atggaggtggacgccccgaggcggacggctcatgaactactagaggagacgcggacggcg
atggaggaggtggtgtcggggatgctgctcatcaagaaggaggggcgcccaaagtccgag
ctccgcgagctgataaccgaaatgtccctcaacttcattgcctttcgccaggtgaaccgg
tcgatcttgatggaggaggatcgcatcaaggcggagacggagggcgcgaaggggccggta
gacaccaccacgctgcagcttcacaacctcatgtacgagaagaaccactacctaaaggct
atcaaggcctgcaaagatttccggtccaagtatcctgatatcgagcttgtggctgaggag
gaatttttcagtagcgcaccggaggatatcaaggggaaggttttggcgaatgatggggct
catgatttgatgttgaagagactcaattttgaattatttcagagaaaagagctttgcaag
cttcatgagaaactggaacaacacaaagcaagtcttctggataccataaccagcagaaag
aagtttctgtcaagtttaccgtcacatctaaaatctctgaagaaagcatctttaccagtg
cagcagcaattagggattttgcataccaagaaactaaagcagcaccatgcagcagagctt
cttccacctcctctttatatagtatactcacaacttttggcacagaaagaagcatttggg
gagaagattgaaatggagattttaggaagtataaaagatgctcaaacttttgccctccaa
cgtataaataaggaaaatggtatgtcatcgaatcctgagaacaacagggtggaggatgat
gcacctgatgaggaggaagatgttcaaaggaggcgaaagaggccaaagaagaatgtgatg
aaggatagtgttgagcaggcaggagtctaccaacttcatccactcaaaatcatccttcat
atatatgatgatgaagattgtcgagcaaaaccgtctagattaatcactctgaagtttgaa
tacttggtaaagttaaatgctgtatgtgttggagtcgacgatgcagaggaaggatcagat
agcagtatcttatgcaacttatttcctgatgacaccggcttggagcttcctcatcagatg
gctaagctttattctggagattctctggcgtttggtgaaaggagaacttcacatccatac
aagtgggcacaacatctagctgggattgactttttgccagaggtccctcccatccatgcc
aatggtgaaactttgaatcctgaacttgtaaaagcttcagatgttacctctgggcttgcg
gtgtaccgccatcagaatcgtgttcacaccattttgcaaaggattcgttccaggaagaaa
gcacagatggctcttgtggagcagcttgattccttgatgaagctcaagtggcccttgcta
gcttgtgaaaatgttccatgggccttgcacacccctttgtgtaccttgcaaagttggtca
ccagcagggctcatccctgattcatctttctcagctggtatggtaggagaagctacaaat
tttgttgatatggatctggacagaagatctgtcacatcatgggaagtagaaagtgcaagg
gaagatggggaacttccaactgcattacctgttgcaacaatgtcagttaattcttctctt
ggtctacctaatgaatcatttcagcatgctgaacattcaagaagtctggctttgatttca
aagaatgttacacctacaaagatggtcaaaacccgtagtttttcaaaatatgaagacgaa
ttggaacgcattttggatagcgagagtgaattggaggagcaagcatgtgttgatcaacta
actgaaaatatgacatccattgtttgcaaaccctgggaggaccatgccgcaagagaattt
gaccttgttcttagtagaacttgtggaaatgatcgaatcgtaaagctaaacgccaaggtc
aagataagcgtggaataccctcttaggccaccaattttcactttgagcactgattcaggt
cattgtaatttgtataatgtgcttcgtgccatggaagcagaggttaatcttcatatcctc
aaaattctgcaattggatcatgaaaattacatcttggcccaccaaatccggtgcttggtg
atgctgttcgattttcattttgatttgcatgatgagaaaagaaagaacacttctgtaata
gatgttggattgtgcaagccagttagtggaactatacttgcaagatcagtaaggggaagg
gaccgcagaaagatgatttcttggaatggcactgattgcatcccaggacaaacacgataa
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