Musa acuminata (dessert banana): 103984049
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Entry
103984049 CDS
T03447
Name
(RefSeq) ubiquitin receptor RAD23d isoform X1
KO
K10839
UV excision repair protein RAD23
Organism
mus
Musa acuminata (dessert banana)
Pathway
mus03420
Nucleotide excision repair
mus04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
mus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
103984049
09124 Replication and repair
03420 Nucleotide excision repair
103984049
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03051 Proteasome [BR:
mus03051
]
103984049
03400 DNA repair and recombination proteins [BR:
mus03400
]
103984049
Proteasome [BR:
mus03051
]
Eukaryotic proteasome
Proteasome interacting proteins (PIPs)
UBL-UBA shuttle proteins
103984049
DNA repair and recombination proteins [BR:
mus03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
XPC-HR23B-CETN2 complex
103984049
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UBA
XPC-binding
ubiquitin
UBA_7
Rad60-SLD
Rad60-SLD_2
TECR_N
UBA_RAD5A
Dsc3_N
CUE
Crinkler
UBA_3
Ubiquitin_4
Ten_N
Motif
Other DBs
NCBI-GeneID:
103984049
NCBI-ProteinID:
XP_009399729
UniProt:
A0A804J1B1
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Position
BXJ2-5:complement(4324880..4337702)
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AA seq
392 aa
AA seq
DB search
MKIFVKTLKGSNFEIDVNPEDTVADVKKNIETSQGKTVYPAEQQMLIHQGKILKDDTTLD
ENKVFENSFLVIMLSKTKGSSSGASTTEKVPLSQAPPAITAPPVPSVPVSAPSQVPAPTL
SSVPTNAPTPTATAAPAPAATISTEVDSYGQAASNLVAGSTLEQTIQQILDMGGGTWERD
TVVRALRAAYNNPERAVEYLYSGIPDHAEAAPVARAPASGQTVNSPVEAPQPVQPAVPSS
GPNANPLDIFPQGLPNVGSHAGGGSLDFLRNSPQFRALQALVQANPQILQPMLQELGKQN
PQIMRLIQEHQGEFLRLINEPAEGTEGSNVLGQLAAGMPQALTVTPEEREAIERLEAMGF
DRALVLQVFFACNKNEELAANYLLDHMHEFED
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgaagatcttcgtcaagacgctcaagggctccaacttcgagatcgacgtcaaccccgaa
gacacggttgctgatgtaaaaaaaaatattgagacctctcaaggaaagactgtttaccct
gctgaacagcaaatgcttatacatcaagggaaaattcttaaagatgatacaacattggat
gagaacaaagttttcgaaaatagttttcttgttataatgctgagtaagaccaagggctca
tctagtggagcttcgactacagaaaaagtacctttaagtcaggccccacctgctattact
gccccccctgttccttcagttcctgtgtcagctccatctcaagtacctgcaccaacattg
tcttcggtacctacaaatgcaccaactcctactgccacagctgctccagcccctgcagct
accatatccacagaagtggattcatatggtcaagcagcatcaaatcttgttgctggtagt
accttggaacaaaccattcaacaaattcttgacatgggtgggggaacttgggagagggac
actgttgttcgtgccttgcgtgctgcatataacaaccctgagcgagctgttgaatattta
tactctggaattcctgatcatgctgaagccgcaccagttgcacgagcaccagcaagtggg
caaacagtcaattccccagttgaggctccacagccagttcagcctgcagttccttcaagt
ggtcctaatgctaatcctttggatatttttccccagggtctgccaaatgttggatcacat
gctggtgggggcagcctggacttcctgaggaatagtccacagtttcgagccttgcaggct
ttggtgcaggcaaaccctcaaattctgcagcccatgcttcaagagctggggaagcaaaat
cctcagattatgaggctcattcaggaacatcagggggagtttcttcgattgataaatgag
cctgctgagggaactgagggtagcaacgtcctaggtcagttagctgctggaatgccacaa
gccctgacggttactcctgaggagcgcgaagccattgagcgtcttgaagcgatgggtttc
gatcgggcgcttgtgctgcaggtcttctttgcttgcaacaagaacgaggagctggctgca
aactatcttttggatcatatgcatgagtttgaagactga
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